Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.67■□□□□ 0.26
SLC6A12P48065 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC6A12P48065 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC6A12P48065 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.67■□□□□ 0.26
SLC6A12P48065 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC6A12P48065 CLEC4GP1-201ENST00000596555 870 ntBASIC16.67■□□□□ 0.26
SLC6A12P48065 AL353135.1-201ENST00000606729 504 ntBASIC16.67■□□□□ 0.26
SLC6A12P48065 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC6A12P48065 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SLC6A12P48065 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC6A12P48065 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC6A12P48065 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC6A12P48065 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC6A12P48065 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.66■□□□□ 0.26
SLC6A12P48065 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC6A12P48065 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 AC011676.5-201ENST00000624864 2660 ntBASIC16.66■□□□□ 0.26
SLC6A12P48065 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC6A12P48065 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SLC6A12P48065 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC6A12P48065 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SLC6A12P48065 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC6A12P48065 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
SLC6A12P48065 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC6A12P48065 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 AC012313.10-201ENST00000623509 926 ntBASIC16.66■□□□□ 0.26
SLC6A12P48065 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC6A12P48065 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC6A12P48065 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC6A12P48065 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC6A12P48065 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC6A12P48065 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLC6A12P48065 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.65■□□□□ 0.26
SLC6A12P48065 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC6A12P48065 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SLC6A12P48065 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC6A12P48065 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC6A12P48065 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC6A12P48065 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 SART3-203ENST00000546611 1184 ntBASIC16.65■□□□□ 0.26
SLC6A12P48065 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.65■□□□□ 0.26
SLC6A12P48065 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 AC008608.2-201ENST00000606089 416 ntBASIC16.65■□□□□ 0.26
SLC6A12P48065 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC6A12P48065 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC6A12P48065 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SLC6A12P48065 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC6A12P48065 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC6A12P48065 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC6A12P48065 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC6A12P48065 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC6A12P48065 NCF1C-201ENST00000438382 1427 ntBASIC16.64■□□□□ 0.25
SLC6A12P48065 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC6A12P48065 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC6A12P48065 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC6A12P48065 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 AP002414.1-201ENST00000391405 1147 ntBASIC16.64■□□□□ 0.25
SLC6A12P48065 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC6A12P48065 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC6A12P48065 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms