Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
MMP13P45452 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP13P45452 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
MMP13P45452 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
MMP13P45452 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP13P45452 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.02■□□□□ 0.47
MMP13P45452 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.02■□□□□ 0.47
MMP13P45452 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.02■□□□□ 0.47
MMP13P45452 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.02■□□□□ 0.47
MMP13P45452 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
MMP13P45452 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MMP13P45452 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
MMP13P45452 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
MMP13P45452 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 AC060834.1-201ENST00000443027 2032 ntBASIC18.01■□□□□ 0.47
MMP13P45452 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP13P45452 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP13P45452 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP13P45452 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
MMP13P45452 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
MMP13P45452 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.01■□□□□ 0.47
MMP13P45452 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 AC096582.2-201ENST00000510860 516 ntBASIC18.01■□□□□ 0.47
MMP13P45452 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.01■□□□□ 0.47
MMP13P45452 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.01■□□□□ 0.47
MMP13P45452 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP13P45452 BNIP3P18-201ENST00000593976 575 ntBASIC18.01■□□□□ 0.47
MMP13P45452 AC099336.1-202ENST00000602961 463 ntBASIC18.01■□□□□ 0.47
MMP13P45452 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.01■□□□□ 0.47
MMP13P45452 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
MMP13P45452 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MMP13P45452 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 TP73-AS1-210ENST00000637775 1455 ntBASIC18.01■□□□□ 0.47
MMP13P45452 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MMP13P45452 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MMP13P45452 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
MMP13P45452 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
MMP13P45452 AC011270.2-201ENST00000624293 2550 ntBASIC18■□□□□ 0.47
MMP13P45452 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18■□□□□ 0.47
MMP13P45452 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 FAM220CP-201ENST00000395253 831 ntBASIC18■□□□□ 0.47
MMP13P45452 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18■□□□□ 0.47
MMP13P45452 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18■□□□□ 0.47
MMP13P45452 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
MMP13P45452 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18■□□□□ 0.47
MMP13P45452 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18■□□□□ 0.47
MMP13P45452 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 AL391005.1-201ENST00000623953 2435 ntBASIC18■□□□□ 0.47
MMP13P45452 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18■□□□□ 0.47
MMP13P45452 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MMP13P45452 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.99■□□□□ 0.47
MMP13P45452 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
MMP13P45452 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MMP13P45452 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.99■□□□□ 0.47
MMP13P45452 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP13P45452 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.99■□□□□ 0.47
MMP13P45452 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MMP13P45452 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
MMP13P45452 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms