Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 AC092171.3-201ENST00000610122 2651 ntBASIC14.2□□□□□ -0.14
NKX2-1P43699 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NKX2-1P43699 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 AC012618.2-201ENST00000428058 849 ntBASIC14.2□□□□□ -0.14
NKX2-1P43699 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX2-1P43699 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX2-1P43699 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX2-1P43699 REXO1L10P-201ENST00000615707 1290 ntBASIC14.2□□□□□ -0.14
NKX2-1P43699 REXO1L12P-201ENST00000622156 912 ntBASIC14.2□□□□□ -0.14
NKX2-1P43699 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-1P43699 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
NKX2-1P43699 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
NKX2-1P43699 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX2-1P43699 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-1P43699 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-1P43699 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-1P43699 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX2-1P43699 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX2-1P43699 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX2-1P43699 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NKX2-1P43699 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 NORAD-201ENST00000565493 5339 ntBASIC14.19□□□□□ -0.14
NKX2-1P43699 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NKX2-1P43699 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
NKX2-1P43699 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
NKX2-1P43699 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX2-1P43699 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX2-1P43699 AC092338.2-201ENST00000568827 1415 ntBASIC14.19□□□□□ -0.14
NKX2-1P43699 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NKX2-1P43699 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX2-1P43699 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 PVRIG2P-201ENST00000435460 978 ntBASIC14.19□□□□□ -0.14
NKX2-1P43699 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.19□□□□□ -0.14
NKX2-1P43699 AC024243.1-201ENST00000609234 778 ntBASIC14.19□□□□□ -0.14
NKX2-1P43699 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
NKX2-1P43699 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NKX2-1P43699 AC092865.7-201ENST00000641832 219 ntBASIC14.19□□□□□ -0.14
NKX2-1P43699 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
NKX2-1P43699 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NKX2-1P43699 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX2-1P43699 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX2-1P43699 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX2-1P43699 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
NKX2-1P43699 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-1P43699 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms