Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COPB2P35606 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 FZD10-202ENST00000539839 3282 ntBASIC19.71■□□□□ 0.75
COPB2P35606 AC068880.1-201ENST00000507289 2297 ntBASIC19.71■□□□□ 0.75
COPB2P35606 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 AL513480.1-201ENST00000451731 511 ntBASIC19.71■□□□□ 0.75
COPB2P35606 AC087163.2-201ENST00000457299 853 ntBASIC19.71■□□□□ 0.75
COPB2P35606 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
COPB2P35606 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
COPB2P35606 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.71■□□□□ 0.75
COPB2P35606 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COPB2P35606 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPB2P35606 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPB2P35606 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COPB2P35606 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COPB2P35606 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPB2P35606 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.7■□□□□ 0.74
COPB2P35606 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
COPB2P35606 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.7■□□□□ 0.74
COPB2P35606 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.7■□□□□ 0.74
COPB2P35606 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COPB2P35606 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COPB2P35606 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPB2P35606 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPB2P35606 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPB2P35606 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPB2P35606 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COPB2P35606 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.7■□□□□ 0.74
COPB2P35606 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COPB2P35606 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COPB2P35606 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.69■□□□□ 0.74
COPB2P35606 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COPB2P35606 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COPB2P35606 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.69■□□□□ 0.74
COPB2P35606 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COPB2P35606 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.69■□□□□ 0.74
COPB2P35606 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.69■□□□□ 0.74
COPB2P35606 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.69■□□□□ 0.74
COPB2P35606 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 AC027612.4-201ENST00000605371 583 ntBASIC19.69■□□□□ 0.74
COPB2P35606 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.69■□□□□ 0.74
COPB2P35606 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COPB2P35606 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.69■□□□□ 0.74
COPB2P35606 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPB2P35606 AL121761.2-201ENST00000598007 1648 ntBASIC19.69■□□□□ 0.74
COPB2P35606 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COPB2P35606 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPB2P35606 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.68■□□□□ 0.74
COPB2P35606 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.68■□□□□ 0.74
COPB2P35606 AC067852.2-201ENST00000590513 2313 ntBASIC19.68■□□□□ 0.74
COPB2P35606 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPB2P35606 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.68■□□□□ 0.74
COPB2P35606 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.68■□□□□ 0.74
COPB2P35606 AC002056.1-201ENST00000395613 760 ntBASIC19.68■□□□□ 0.74
COPB2P35606 TSEN15P1-201ENST00000423257 515 ntBASIC19.68■□□□□ 0.74
COPB2P35606 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.68■□□□□ 0.74
COPB2P35606 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPB2P35606 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPB2P35606 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.68■□□□□ 0.74
COPB2P35606 SLC25A6P2-201ENST00000497974 877 ntBASIC19.68■□□□□ 0.74
COPB2P35606 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPB2P35606 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.68■□□□□ 0.74
COPB2P35606 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.68■□□□□ 0.74
COPB2P35606 AC105339.1-204ENST00000636249 355 ntBASIC19.68■□□□□ 0.74
COPB2P35606 AL645728.2-201ENST00000641974 660 ntBASIC19.68■□□□□ 0.74
COPB2P35606 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPB2P35606 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms