Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT9P35527 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT9P35527 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
KRT9P35527 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT9P35527 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.95■□□□□ 0.62
KRT9P35527 KRT8P26-201ENST00000534154 1276 ntBASIC18.95■□□□□ 0.62
KRT9P35527 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.95■□□□□ 0.62
KRT9P35527 AC090616.6-201ENST00000582640 721 ntBASIC18.95■□□□□ 0.62
KRT9P35527 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 IGHV3-41-201ENST00000613121 348 ntBASIC18.95■□□□□ 0.62
KRT9P35527 AC124864.1-201ENST00000623408 392 ntBASIC18.95■□□□□ 0.62
KRT9P35527 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT9P35527 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.95■□□□□ 0.62
KRT9P35527 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT9P35527 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT9P35527 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KRT9P35527 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KRT9P35527 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 COX5BP2-201ENST00000392354 334 ntBASIC18.94■□□□□ 0.62
KRT9P35527 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT9P35527 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT9P35527 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT9P35527 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT9P35527 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KRT9P35527 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT9P35527 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
KRT9P35527 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT9P35527 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT9P35527 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.94■□□□□ 0.62
KRT9P35527 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
KRT9P35527 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT9P35527 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT9P35527 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KRT9P35527 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.93■□□□□ 0.62
KRT9P35527 BX276092.5-203ENST00000456199 560 ntBASIC18.93■□□□□ 0.62
KRT9P35527 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.93■□□□□ 0.62
KRT9P35527 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.93■□□□□ 0.62
KRT9P35527 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.93■□□□□ 0.62
KRT9P35527 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 RNF216P1-203ENST00000404404 2427 ntBASIC18.93■□□□□ 0.62
KRT9P35527 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT9P35527 AC097374.2-201ENST00000618617 1306 ntBASIC18.93■□□□□ 0.62
KRT9P35527 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT9P35527 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT9P35527 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT9P35527 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
KRT9P35527 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT9P35527 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT9P35527 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms