Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN1P35523 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN1P35523 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.7■□□□□ 0.74
CLCN1P35523 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 AC087499.1-201ENST00000418141 1075 ntBASIC19.7■□□□□ 0.74
CLCN1P35523 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.7■□□□□ 0.74
CLCN1P35523 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.7■□□□□ 0.74
CLCN1P35523 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN1P35523 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.7■□□□□ 0.74
CLCN1P35523 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN1P35523 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLCN1P35523 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN1P35523 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN1P35523 LINC01568-207ENST00000641790 1380 ntBASIC19.7■□□□□ 0.74
CLCN1P35523 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 AC104390.1-201ENST00000555663 520 ntBASIC19.69■□□□□ 0.74
CLCN1P35523 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
CLCN1P35523 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 AC112497.1-201ENST00000624824 639 ntBASIC19.69■□□□□ 0.74
CLCN1P35523 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 TNRC18P2-201ENST00000417666 2714 ntBASIC19.69■□□□□ 0.74
CLCN1P35523 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLCN1P35523 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN1P35523 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN1P35523 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
CLCN1P35523 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN1P35523 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLCN1P35523 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN1P35523 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.68■□□□□ 0.74
CLCN1P35523 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.68■□□□□ 0.74
CLCN1P35523 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.68■□□□□ 0.74
CLCN1P35523 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN1P35523 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLCN1P35523 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN1P35523 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 CICP13-201ENST00000422015 2789 ntBASIC19.67■□□□□ 0.74
CLCN1P35523 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCN1P35523 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCN1P35523 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCN1P35523 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLCN1P35523 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLCN1P35523 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms