Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC22.34■■□□□ 1.17
RXRBP28702 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
RXRBP28702 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.34■■□□□ 1.17
RXRBP28702 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC22.34■■□□□ 1.17
RXRBP28702 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
RXRBP28702 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
RXRBP28702 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC22.34■■□□□ 1.17
RXRBP28702 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC22.34■■□□□ 1.17
RXRBP28702 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC22.34■■□□□ 1.17
RXRBP28702 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RXRBP28702 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.33■■□□□ 1.17
RXRBP28702 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RXRBP28702 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RXRBP28702 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RXRBP28702 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC22.33■■□□□ 1.17
RXRBP28702 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
RXRBP28702 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
RXRBP28702 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RXRBP28702 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC22.33■■□□□ 1.17
RXRBP28702 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RXRBP28702 AC099336.1-201ENST00000417053 1171 ntBASIC22.33■■□□□ 1.17
RXRBP28702 MEP1AP4-201ENST00000423244 1087 ntBASIC22.33■■□□□ 1.17
RXRBP28702 KLF2P4-201ENST00000451959 1225 ntBASIC22.33■■□□□ 1.17
RXRBP28702 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC22.33■■□□□ 1.17
RXRBP28702 AC079328.1-201ENST00000560358 952 ntBASIC22.33■■□□□ 1.17
RXRBP28702 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC22.33■■□□□ 1.17
RXRBP28702 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC22.33■■□□□ 1.17
RXRBP28702 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC22.33■■□□□ 1.17
RXRBP28702 WFDC1-204ENST00000613603 549 ntBASIC22.33■■□□□ 1.17
RXRBP28702 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC22.33■■□□□ 1.17
RXRBP28702 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RXRBP28702 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.33■■□□□ 1.16
RXRBP28702 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.33■■□□□ 1.16
RXRBP28702 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.33■■□□□ 1.16
RXRBP28702 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RXRBP28702 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC22.32■■□□□ 1.16
RXRBP28702 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 AC005229.1-201ENST00000392885 409 ntBASIC22.32■■□□□ 1.16
RXRBP28702 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 SLC25A24P2-201ENST00000415059 510 ntBASIC22.32■■□□□ 1.16
RXRBP28702 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC22.32■■□□□ 1.16
RXRBP28702 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC22.32■■□□□ 1.16
RXRBP28702 MIR3909-201ENST00000579518 119 ntBASIC22.32■■□□□ 1.16
RXRBP28702 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC22.32■■□□□ 1.16
RXRBP28702 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC22.32■■□□□ 1.16
RXRBP28702 5S_rRNA.22-201ENST00000614916 106 ntBASIC22.32■■□□□ 1.16
RXRBP28702 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC22.32■■□□□ 1.16
RXRBP28702 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
RXRBP28702 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.32■■□□□ 1.16
RXRBP28702 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
RXRBP28702 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC22.31■■□□□ 1.16
RXRBP28702 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RXRBP28702 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC22.31■■□□□ 1.16
RXRBP28702 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RXRBP28702 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 LINC01006-201ENST00000333319 2292 ntBASIC22.31■■□□□ 1.16
RXRBP28702 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 HLA-H-201ENST00000383620 1096 ntBASIC22.31■■□□□ 1.16
RXRBP28702 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 AL080243.2-201ENST00000418783 582 ntBASIC22.31■■□□□ 1.16
RXRBP28702 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC22.31■■□□□ 1.16
RXRBP28702 MPRIPP1-201ENST00000452433 1089 ntBASIC22.31■■□□□ 1.16
RXRBP28702 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 RN7SL618P-201ENST00000477850 296 ntBASIC22.31■■□□□ 1.16
RXRBP28702 TPRX2P-201ENST00000535362 881 ntBASIC22.31■■□□□ 1.16
RXRBP28702 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC22.31■■□□□ 1.16
RXRBP28702 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RXRBP28702 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC22.31■■□□□ 1.16
RXRBP28702 PDIA3P1-201ENST00000471856 1510 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms