Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP8P22894 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP8P22894 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MMP8P22894 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP8P22894 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
MMP8P22894 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 NKILA-202ENST00000614771 2598 ntBASIC18.17■□□□□ 0.5
MMP8P22894 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 AKR1C7P-201ENST00000305623 895 ntBASIC18.17■□□□□ 0.5
MMP8P22894 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.17■□□□□ 0.5
MMP8P22894 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
MMP8P22894 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.17■□□□□ 0.5
MMP8P22894 AC106886.4-201ENST00000623557 2502 ntBASIC18.17■□□□□ 0.5
MMP8P22894 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
MMP8P22894 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MMP8P22894 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.17■□□□□ 0.5
MMP8P22894 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP8P22894 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.16■□□□□ 0.5
MMP8P22894 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MMP8P22894 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.16■□□□□ 0.5
MMP8P22894 KRT18P56-201ENST00000507275 550 ntBASIC18.16■□□□□ 0.5
MMP8P22894 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.16■□□□□ 0.5
MMP8P22894 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.16■□□□□ 0.5
MMP8P22894 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.16■□□□□ 0.5
MMP8P22894 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.16■□□□□ 0.5
MMP8P22894 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.16■□□□□ 0.5
MMP8P22894 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 AL353135.1-201ENST00000606729 504 ntBASIC18.16■□□□□ 0.5
MMP8P22894 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MMP8P22894 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 AC011676.5-201ENST00000624864 2660 ntBASIC18.16■□□□□ 0.5
MMP8P22894 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.16■□□□□ 0.5
MMP8P22894 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP8P22894 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.16■□□□□ 0.5
MMP8P22894 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.15■□□□□ 0.5
MMP8P22894 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.15■□□□□ 0.5
MMP8P22894 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MMP8P22894 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MMP8P22894 AC005915.1-201ENST00000624912 2018 ntBASIC18.15■□□□□ 0.5
MMP8P22894 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MMP8P22894 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MMP8P22894 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 SART3-203ENST00000546611 1184 ntBASIC18.15■□□□□ 0.5
MMP8P22894 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.15■□□□□ 0.5
MMP8P22894 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MMP8P22894 AC008608.2-201ENST00000606089 416 ntBASIC18.15■□□□□ 0.5
MMP8P22894 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.15■□□□□ 0.5
MMP8P22894 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MMP8P22894 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MMP8P22894 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.15■□□□□ 0.5
MMP8P22894 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.15■□□□□ 0.5
MMP8P22894 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.15■□□□□ 0.5
MMP8P22894 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.15■□□□□ 0.5
MMP8P22894 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
MMP8P22894 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP8P22894 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MMP8P22894 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
MMP8P22894 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MMP8P22894 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
MMP8P22894 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
MMP8P22894 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MMP8P22894 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP8P22894 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP8P22894 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms