Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ERCC2P18074 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.8■□□□□ 0.44
ERCC2P18074 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC2P18074 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ERCC2P18074 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC2P18074 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC2P18074 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ERCC2P18074 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ERCC2P18074 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ERCC2P18074 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ERCC2P18074 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ERCC2P18074 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC2P18074 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ERCC2P18074 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 EGFEM1P-202ENST00000431685 1563 ntBASIC17.79■□□□□ 0.44
ERCC2P18074 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ERCC2P18074 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 SCARNA2-201ENST00000458748 420 ntBASIC17.79■□□□□ 0.44
ERCC2P18074 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.79■□□□□ 0.44
ERCC2P18074 AC064862.7-201ENST00000604520 867 ntBASIC17.79■□□□□ 0.44
ERCC2P18074 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
ERCC2P18074 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.79■□□□□ 0.44
ERCC2P18074 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ERCC2P18074 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
ERCC2P18074 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.79■□□□□ 0.44
ERCC2P18074 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC2P18074 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC2P18074 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.78■□□□□ 0.44
ERCC2P18074 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC2P18074 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ERCC2P18074 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.78■□□□□ 0.44
ERCC2P18074 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC2P18074 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.78■□□□□ 0.44
ERCC2P18074 KRT126P-201ENST00000549467 1181 ntBASIC17.78■□□□□ 0.44
ERCC2P18074 AC021087.4-201ENST00000563761 564 ntBASIC17.78■□□□□ 0.44
ERCC2P18074 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 RN7SL510P-201ENST00000581311 263 ntBASIC17.78■□□□□ 0.44
ERCC2P18074 MTDHP4-201ENST00000600287 670 ntBASIC17.78■□□□□ 0.44
ERCC2P18074 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ERCC2P18074 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 AC092053.1-201ENST00000605787 1936 ntBASIC17.78■□□□□ 0.44
ERCC2P18074 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ERCC2P18074 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ERCC2P18074 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ERCC2P18074 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC2P18074 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC2P18074 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.77■□□□□ 0.44
ERCC2P18074 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ERCC2P18074 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.77■□□□□ 0.44
ERCC2P18074 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC2P18074 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ERCC2P18074 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC2P18074 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC2P18074 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC2P18074 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC2P18074 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC2P18074 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERCC2P18074 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ERCC2P18074 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.77■□□□□ 0.44
ERCC2P18074 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.77■□□□□ 0.44
ERCC2P18074 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms