Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 AC097637.2-201ENST00000624096 1997 ntBASIC14.3□□□□□ -0.12
CCL3L1P16619 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 AC016396.2-201ENST00000562575 1417 ntBASIC14.3□□□□□ -0.12
CCL3L1P16619 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL3L1P16619 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL3L1P16619 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL3L1P16619 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL3L1P16619 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCL3L1P16619 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL3L1P16619 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL3L1P16619 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL3L1P16619 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL3L1P16619 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL3L1P16619 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL3L1P16619 AC021087.4-201ENST00000563761 564 ntBASIC14.29□□□□□ -0.12
CCL3L1P16619 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.29□□□□□ -0.12
CCL3L1P16619 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.29□□□□□ -0.12
CCL3L1P16619 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CCL3L1P16619 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL3L1P16619 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
CCL3L1P16619 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCL3L1P16619 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL3L1P16619 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL3L1P16619 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL3L1P16619 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL3L1P16619 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CCL3L1P16619 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL3L1P16619 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL3L1P16619 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCL3L1P16619 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL3L1P16619 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL3L1P16619 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 FAAHP1-202ENST00000446499 1238 ntBASIC14.28□□□□□ -0.12
CCL3L1P16619 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL3L1P16619 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCL3L1P16619 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL3L1P16619 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL3L1P16619 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL3L1P16619 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL3L1P16619 MTDHP4-201ENST00000600287 670 ntBASIC14.28□□□□□ -0.12
CCL3L1P16619 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL3L1P16619 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCL3L1P16619 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CCL3L1P16619 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL3L1P16619 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.27□□□□□ -0.12
CCL3L1P16619 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL3L1P16619 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL3L1P16619 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL3L1P16619 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL3L1P16619 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCL3L1P16619 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL3L1P16619 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL3L1P16619 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CCL3L1P16619 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCL3L1P16619 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL3L1P16619 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCL3L1P16619 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.27□□□□□ -0.12
CCL3L1P16619 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.27□□□□□ -0.12
CCL3L1P16619 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL3L1P16619 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
CCL3L1P16619 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.27□□□□□ -0.12
CCL3L1P16619 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL3L1P16619 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms