Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GPS2P2-201ENST00000430745 888 ntBASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 SPCS2P4-201ENST00000436160 681 ntBASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 AKAP8P1-201ENST00000434743 1349 ntBASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
CSB-PGBD3P0DP91 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 FLJ13224-201ENST00000313737 1514 ntBASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 IGHV3-42-201ENST00000520410 361 ntBASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.78■■□□□ 1.24
CSB-PGBD3P0DP91 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 FO538757.1-201ENST00000623083 1397 ntBASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 AC087641.1-201ENST00000557561 1021 ntBASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 RN7SL204P-201ENST00000582831 262 ntBASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 AL161645.1-201ENST00000622716 1255 ntBASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.77■■□□□ 1.24
CSB-PGBD3P0DP91 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
CSB-PGBD3P0DP91 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 COPE-202ENST00000349893 948 ntTSL 2 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 HMGA1P7-201ENST00000406908 502 ntBASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 TREML5P-201ENST00000421694 576 ntBASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 UGT1A2P-201ENST00000454886 866 ntBASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 MMP17-203ENST00000535004 719 ntTSL 3 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 AL390754.1-201ENST00000619088 582 ntBASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CSB-PGBD3P0DP91 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms