Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.37■□□□□ 0.37
APOA4P06727 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.37■□□□□ 0.37
APOA4P06727 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.37■□□□□ 0.37
APOA4P06727 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.37■□□□□ 0.37
APOA4P06727 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.37■□□□□ 0.37
APOA4P06727 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.37■□□□□ 0.37
APOA4P06727 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.37■□□□□ 0.37
APOA4P06727 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOA4P06727 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOA4P06727 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.37■□□□□ 0.37
APOA4P06727 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APOA4P06727 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.37■□□□□ 0.37
APOA4P06727 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOA4P06727 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
APOA4P06727 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
APOA4P06727 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
APOA4P06727 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.37■□□□□ 0.37
APOA4P06727 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.37■□□□□ 0.37
APOA4P06727 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
APOA4P06727 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.36■□□□□ 0.37
APOA4P06727 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
APOA4P06727 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.36■□□□□ 0.37
APOA4P06727 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
APOA4P06727 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.36■□□□□ 0.37
APOA4P06727 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
APOA4P06727 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
APOA4P06727 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.36■□□□□ 0.37
APOA4P06727 IGHV3-47-201ENST00000425060 335 ntBASIC17.36■□□□□ 0.37
APOA4P06727 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 HCG4P8-203ENST00000443049 980 ntBASIC17.36■□□□□ 0.37
APOA4P06727 AC122714.2-201ENST00000502787 707 ntBASIC17.36■□□□□ 0.37
APOA4P06727 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.36■□□□□ 0.37
APOA4P06727 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
APOA4P06727 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APOA4P06727 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
APOA4P06727 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.36■□□□□ 0.37
APOA4P06727 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
APOA4P06727 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.35■□□□□ 0.37
APOA4P06727 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
APOA4P06727 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
APOA4P06727 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
APOA4P06727 AC106886.4-201ENST00000623557 2502 ntBASIC17.35■□□□□ 0.37
APOA4P06727 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.35■□□□□ 0.37
APOA4P06727 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.35■□□□□ 0.37
APOA4P06727 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 AC096582.2-201ENST00000510860 516 ntBASIC17.35■□□□□ 0.37
APOA4P06727 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.35■□□□□ 0.37
APOA4P06727 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.35■□□□□ 0.37
APOA4P06727 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
APOA4P06727 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.35■□□□□ 0.37
APOA4P06727 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.35■□□□□ 0.37
APOA4P06727 TP73-AS1-210ENST00000637775 1455 ntBASIC17.35■□□□□ 0.37
APOA4P06727 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.35■□□□□ 0.37
APOA4P06727 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.35■□□□□ 0.37
APOA4P06727 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APOA4P06727 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms