Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
WNT1P04628 AL121761.2-201ENST00000598007 1648 ntBASIC16.92■□□□□ 0.3
WNT1P04628 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.92■□□□□ 0.3
WNT1P04628 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
WNT1P04628 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
WNT1P04628 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT1P04628 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 FZD10-202ENST00000539839 3282 ntBASIC16.91■□□□□ 0.3
WNT1P04628 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
WNT1P04628 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
WNT1P04628 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.91■□□□□ 0.3
WNT1P04628 ADH5P3-201ENST00000433842 1137 ntBASIC16.91■□□□□ 0.3
WNT1P04628 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.91■□□□□ 0.3
WNT1P04628 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT1P04628 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.91■□□□□ 0.3
WNT1P04628 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
WNT1P04628 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.91■□□□□ 0.3
WNT1P04628 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.91■□□□□ 0.3
WNT1P04628 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
WNT1P04628 ABALON-201ENST00000629058 1903 ntBASIC16.91■□□□□ 0.3
WNT1P04628 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT1P04628 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT1P04628 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.91■□□□□ 0.3
WNT1P04628 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
WNT1P04628 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
WNT1P04628 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.91■□□□□ 0.3
WNT1P04628 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
WNT1P04628 AC135050.7-201ENST00000624508 2218 ntBASIC16.9■□□□□ 0.3
WNT1P04628 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
WNT1P04628 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
WNT1P04628 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.9■□□□□ 0.3
WNT1P04628 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.9■□□□□ 0.3
WNT1P04628 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
WNT1P04628 MIR770-201ENST00000390219 98 ntBASIC16.9■□□□□ 0.3
WNT1P04628 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.9■□□□□ 0.3
WNT1P04628 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
WNT1P04628 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.9■□□□□ 0.3
WNT1P04628 AC107918.2-201ENST00000530817 355 ntBASIC16.9■□□□□ 0.3
WNT1P04628 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.9■□□□□ 0.3
WNT1P04628 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.9■□□□□ 0.3
WNT1P04628 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.9■□□□□ 0.3
WNT1P04628 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
WNT1P04628 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
WNT1P04628 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.9■□□□□ 0.3
WNT1P04628 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.9■□□□□ 0.3
WNT1P04628 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
WNT1P04628 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.9■□□□□ 0.3
WNT1P04628 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
WNT1P04628 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.9■□□□□ 0.3
WNT1P04628 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
WNT1P04628 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
WNT1P04628 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
WNT1P04628 BICD1-207ENST00000551848 1962 ntBASIC16.89■□□□□ 0.3
WNT1P04628 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
WNT1P04628 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.89■□□□□ 0.29
WNT1P04628 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.89■□□□□ 0.29
WNT1P04628 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
WNT1P04628 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.89■□□□□ 0.29
WNT1P04628 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
WNT1P04628 LINC00304-203ENST00000565008 1864 ntBASIC16.89■□□□□ 0.29
WNT1P04628 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
WNT1P04628 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.89■□□□□ 0.29
WNT1P04628 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.89■□□□□ 0.29
WNT1P04628 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.89■□□□□ 0.29
WNT1P04628 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
WNT1P04628 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
WNT1P04628 AC112191.1-201ENST00000523689 701 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms