Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
OPN1SWP03999 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
OPN1SWP03999 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
OPN1SWP03999 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
OPN1SWP03999 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OPN1SWP03999 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
OPN1SWP03999 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
OPN1SWP03999 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OPN1SWP03999 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
OPN1SWP03999 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
OPN1SWP03999 AC097374.2-201ENST00000618617 1306 ntBASIC16.19■□□□□ 0.18
OPN1SWP03999 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.19■□□□□ 0.18
OPN1SWP03999 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
OPN1SWP03999 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 AC083849.1-201ENST00000615227 514 ntBASIC16.19■□□□□ 0.18
OPN1SWP03999 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.19■□□□□ 0.18
OPN1SWP03999 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.19■□□□□ 0.18
OPN1SWP03999 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPN1SWP03999 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.18■□□□□ 0.18
OPN1SWP03999 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
OPN1SWP03999 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.18■□□□□ 0.18
OPN1SWP03999 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 IGHV3-52-201ENST00000519770 353 ntBASIC16.18■□□□□ 0.18
OPN1SWP03999 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
OPN1SWP03999 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.18■□□□□ 0.18
OPN1SWP03999 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.18■□□□□ 0.18
OPN1SWP03999 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.18■□□□□ 0.18
OPN1SWP03999 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.18■□□□□ 0.18
OPN1SWP03999 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
OPN1SWP03999 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
OPN1SWP03999 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.18■□□□□ 0.18
OPN1SWP03999 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.18■□□□□ 0.18
OPN1SWP03999 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms