Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC128688.1-201ENST00000487626 519 ntBASIC19.86■□□□□ 0.77
MBD3O95983 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.86■□□□□ 0.77
MBD3O95983 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD3O95983 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD3O95983 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
MBD3O95983 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
MBD3O95983 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.85■□□□□ 0.77
MBD3O95983 CD99P1-205ENST00000527459 561 ntBASIC19.85■□□□□ 0.77
MBD3O95983 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
MBD3O95983 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.85■□□□□ 0.77
MBD3O95983 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
MBD3O95983 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.85■□□□□ 0.77
MBD3O95983 AC092666.2-201ENST00000613287 246 ntBASIC19.85■□□□□ 0.77
MBD3O95983 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.85■□□□□ 0.77
MBD3O95983 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.85■□□□□ 0.77
MBD3O95983 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD3O95983 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.85■□□□□ 0.77
MBD3O95983 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
MBD3O95983 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.85■□□□□ 0.77
MBD3O95983 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MBD3O95983 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.85■□□□□ 0.77
MBD3O95983 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MBD3O95983 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MBD3O95983 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
MBD3O95983 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MBD3O95983 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.84■□□□□ 0.77
MBD3O95983 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD3O95983 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MBD3O95983 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
MBD3O95983 INGX-201ENST00000359239 846 ntBASIC19.84■□□□□ 0.77
MBD3O95983 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 COX5BP2-201ENST00000392354 334 ntBASIC19.84■□□□□ 0.77
MBD3O95983 MIR1238-201ENST00000408483 83 ntBASIC19.84■□□□□ 0.77
MBD3O95983 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.84■□□□□ 0.77
MBD3O95983 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
MBD3O95983 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.84■□□□□ 0.77
MBD3O95983 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.84■□□□□ 0.77
MBD3O95983 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
MBD3O95983 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 HLA-A-202ENST00000376806 1854 ntBASIC19.84■□□□□ 0.77
MBD3O95983 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MBD3O95983 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MBD3O95983 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3O95983 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3O95983 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
MBD3O95983 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.83■□□□□ 0.77
MBD3O95983 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3O95983 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.83■□□□□ 0.77
MBD3O95983 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3O95983 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3O95983 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3O95983 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.83■□□□□ 0.77
MBD3O95983 AC034232.1-201ENST00000506026 1064 ntBASIC19.83■□□□□ 0.77
MBD3O95983 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3O95983 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3O95983 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MBD3O95983 ITM2C-210ENST00000620962 501 ntBASIC19.83■□□□□ 0.77
MBD3O95983 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.83■□□□□ 0.76
MBD3O95983 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
MBD3O95983 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3O95983 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.83■□□□□ 0.76
MBD3O95983 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3O95983 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3O95983 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3O95983 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3O95983 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
MBD3O95983 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.83■□□□□ 0.76
MBD3O95983 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
MBD3O95983 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MBD3O95983 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.82■□□□□ 0.76
MBD3O95983 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MBD3O95983 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MBD3O95983 AC105917.1-201ENST00000506637 2539 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms