Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.39■□□□□ 0.69
GGPS1O95749 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.39■□□□□ 0.69
GGPS1O95749 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.39■□□□□ 0.69
GGPS1O95749 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.39■□□□□ 0.69
GGPS1O95749 GNAS-203ENST00000306120 1878 ntBASIC19.39■□□□□ 0.69
GGPS1O95749 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GGPS1O95749 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GGPS1O95749 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GGPS1O95749 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.38■□□□□ 0.69
GGPS1O95749 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GGPS1O95749 AC090340.1-201ENST00000620778 4980 ntBASIC19.38■□□□□ 0.69
GGPS1O95749 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GGPS1O95749 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
GGPS1O95749 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GGPS1O95749 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GGPS1O95749 LYSMD4-203ENST00000378904 2122 ntBASIC19.38■□□□□ 0.69
GGPS1O95749 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
GGPS1O95749 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GGPS1O95749 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.38■□□□□ 0.69
GGPS1O95749 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.38■□□□□ 0.69
GGPS1O95749 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GGPS1O95749 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.38■□□□□ 0.69
GGPS1O95749 RHOQP3-201ENST00000437982 621 ntBASIC19.38■□□□□ 0.69
GGPS1O95749 DNAJB3-202ENST00000449667 1266 ntBASIC19.38■□□□□ 0.69
GGPS1O95749 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.38■□□□□ 0.69
GGPS1O95749 KRT19P2-202ENST00000557173 1012 ntBASIC19.38■□□□□ 0.69
GGPS1O95749 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.38■□□□□ 0.69
GGPS1O95749 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.38■□□□□ 0.69
GGPS1O95749 AL078644.1-201ENST00000609881 752 ntBASIC19.38■□□□□ 0.69
GGPS1O95749 C20orf181-201ENST00000623918 480 ntBASIC19.38■□□□□ 0.69
GGPS1O95749 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GGPS1O95749 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GGPS1O95749 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GGPS1O95749 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GGPS1O95749 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.37■□□□□ 0.69
GGPS1O95749 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GGPS1O95749 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.37■□□□□ 0.69
GGPS1O95749 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GGPS1O95749 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.37■□□□□ 0.69
GGPS1O95749 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.37■□□□□ 0.69
GGPS1O95749 YBX1P5-201ENST00000509441 847 ntBASIC19.37■□□□□ 0.69
GGPS1O95749 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.37■□□□□ 0.69
GGPS1O95749 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.37■□□□□ 0.69
GGPS1O95749 PDPK2P-202ENST00000562415 1191 ntBASIC19.37■□□□□ 0.69
GGPS1O95749 MIR4469-201ENST00000583919 79 ntBASIC19.37■□□□□ 0.69
GGPS1O95749 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
GGPS1O95749 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.37■□□□□ 0.69
GGPS1O95749 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 AL355312.1-201ENST00000407115 2176 ntBASIC19.37■□□□□ 0.69
GGPS1O95749 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.37■□□□□ 0.69
GGPS1O95749 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GGPS1O95749 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.37■□□□□ 0.69
GGPS1O95749 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GGPS1O95749 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GGPS1O95749 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GGPS1O95749 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GGPS1O95749 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GGPS1O95749 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.36■□□□□ 0.69
GGPS1O95749 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
GGPS1O95749 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.36■□□□□ 0.69
GGPS1O95749 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.36■□□□□ 0.69
GGPS1O95749 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.36■□□□□ 0.69
GGPS1O95749 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GGPS1O95749 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GGPS1O95749 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms