Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPBO95292 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.42■□□□□ 0.38
VAPBO95292 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VAPBO95292 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.41■□□□□ 0.38
VAPBO95292 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 INTS4P1-201ENST00000438455 1935 ntBASIC17.41■□□□□ 0.38
VAPBO95292 AC009336.1-201ENST00000608941 1553 ntBASIC17.41■□□□□ 0.38
VAPBO95292 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
VAPBO95292 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
VAPBO95292 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.41■□□□□ 0.38
VAPBO95292 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.41■□□□□ 0.38
VAPBO95292 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
VAPBO95292 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
VAPBO95292 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.41■□□□□ 0.38
VAPBO95292 RCN1P2-201ENST00000398357 915 ntBASIC17.41■□□□□ 0.38
VAPBO95292 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.41■□□□□ 0.38
VAPBO95292 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VAPBO95292 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.41■□□□□ 0.38
VAPBO95292 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VAPBO95292 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.41■□□□□ 0.38
VAPBO95292 STK19B-204ENST00000512515 211 ntBASIC17.41■□□□□ 0.38
VAPBO95292 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.41■□□□□ 0.38
VAPBO95292 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.41■□□□□ 0.38
VAPBO95292 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.41■□□□□ 0.38
VAPBO95292 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.41■□□□□ 0.38
VAPBO95292 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.41■□□□□ 0.38
VAPBO95292 AC091076.1-201ENST00000610741 619 ntBASIC17.41■□□□□ 0.38
VAPBO95292 AD001527.2-201ENST00000622994 785 ntBASIC17.41■□□□□ 0.38
VAPBO95292 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
VAPBO95292 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 AC092053.1-201ENST00000605787 1936 ntBASIC17.41■□□□□ 0.38
VAPBO95292 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VAPBO95292 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.4■□□□□ 0.38
VAPBO95292 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
VAPBO95292 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.4■□□□□ 0.38
VAPBO95292 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.4■□□□□ 0.38
VAPBO95292 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VAPBO95292 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
VAPBO95292 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VAPBO95292 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.4■□□□□ 0.38
VAPBO95292 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
VAPBO95292 AC104819.1-201ENST00000504587 486 ntBASIC17.4■□□□□ 0.38
VAPBO95292 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.4■□□□□ 0.38
VAPBO95292 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.4■□□□□ 0.38
VAPBO95292 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.4■□□□□ 0.38
VAPBO95292 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VAPBO95292 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VAPBO95292 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.4■□□□□ 0.38
VAPBO95292 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VAPBO95292 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.39■□□□□ 0.38
VAPBO95292 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VAPBO95292 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VAPBO95292 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.39■□□□□ 0.38
VAPBO95292 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.39■□□□□ 0.37
VAPBO95292 AL135999.2-201ENST00000622438 1686 ntBASIC17.39■□□□□ 0.37
VAPBO95292 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.39■□□□□ 0.37
VAPBO95292 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VAPBO95292 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VAPBO95292 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPBO95292 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VAPBO95292 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPBO95292 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPBO95292 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPBO95292 AC003669.1-201ENST00000334569 611 ntBASIC17.39■□□□□ 0.37
VAPBO95292 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VAPBO95292 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
VAPBO95292 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
VAPBO95292 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms