Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SNX4O95219 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.33■□□□□ 0.2
SNX4O95219 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.33■□□□□ 0.2
SNX4O95219 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNX4O95219 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.33■□□□□ 0.2
SNX4O95219 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SNX4O95219 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.32■□□□□ 0.2
SNX4O95219 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SNX4O95219 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SNX4O95219 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SNX4O95219 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX4O95219 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SNX4O95219 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX4O95219 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SNX4O95219 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.32■□□□□ 0.2
SNX4O95219 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX4O95219 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX4O95219 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNX4O95219 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SNX4O95219 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SNX4O95219 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX4O95219 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX4O95219 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX4O95219 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.31■□□□□ 0.2
SNX4O95219 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.31■□□□□ 0.2
SNX4O95219 TPM4P1-201ENST00000436100 807 ntBASIC16.31■□□□□ 0.2
SNX4O95219 AC096582.2-201ENST00000510860 516 ntBASIC16.31■□□□□ 0.2
SNX4O95219 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX4O95219 BNIP3P18-201ENST00000593976 575 ntBASIC16.31■□□□□ 0.2
SNX4O95219 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SNX4O95219 AC116407.2-201ENST00000613639 860 ntBASIC16.31■□□□□ 0.2
SNX4O95219 AC114341.1-201ENST00000618070 349 ntBASIC16.31■□□□□ 0.2
SNX4O95219 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.31■□□□□ 0.2
SNX4O95219 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.31■□□□□ 0.2
SNX4O95219 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SNX4O95219 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SNX4O95219 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.31■□□□□ 0.2
SNX4O95219 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX4O95219 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX4O95219 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.3■□□□□ 0.2
SNX4O95219 TP73-AS1-210ENST00000637775 1455 ntBASIC16.3■□□□□ 0.2
SNX4O95219 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SNX4O95219 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX4O95219 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.3■□□□□ 0.2
SNX4O95219 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNX4O95219 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms