Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 GGTLC5P-201ENST00000617623 998 ntBASIC17.29■□□□□ 0.36
PCDH8O95206 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDH8O95206 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDH8O95206 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH8O95206 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDH8O95206 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDH8O95206 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDH8O95206 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDH8O95206 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH8O95206 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDH8O95206 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH8O95206 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
PCDH8O95206 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDH8O95206 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PCDH8O95206 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDH8O95206 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 KRT18P2-201ENST00000447938 1258 ntBASIC17.28■□□□□ 0.36
PCDH8O95206 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH8O95206 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 AC002347.1-201ENST00000569543 541 ntBASIC17.28■□□□□ 0.36
PCDH8O95206 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 AC010327.4-202ENST00000591484 748 ntBASIC17.28■□□□□ 0.36
PCDH8O95206 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PCDH8O95206 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH8O95206 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDH8O95206 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH8O95206 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDH8O95206 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH8O95206 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCDH8O95206 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH8O95206 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH8O95206 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH8O95206 PRSS29P-201ENST00000440800 595 ntBASIC17.27■□□□□ 0.36
PCDH8O95206 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH8O95206 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.27■□□□□ 0.36
PCDH8O95206 MIR3687-2-201ENST00000577708 61 ntBASIC17.27■□□□□ 0.36
PCDH8O95206 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDH8O95206 MIR3687-1-201ENST00000614492 61 ntBASIC17.27■□□□□ 0.36
PCDH8O95206 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH8O95206 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH8O95206 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH8O95206 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH8O95206 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
PCDH8O95206 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH8O95206 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDH8O95206 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PCDH8O95206 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH8O95206 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH8O95206 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH8O95206 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH8O95206 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
PCDH8O95206 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH8O95206 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH8O95206 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH8O95206 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH8O95206 YBX2P1-201ENST00000394192 760 ntBASIC17.26■□□□□ 0.35
PCDH8O95206 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDH8O95206 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH8O95206 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDH8O95206 DNAJB3-201ENST00000446806 729 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms