Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.24□□□□□ -0.13
SCAF4O95104 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.24□□□□□ -0.13
SCAF4O95104 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCAF4O95104 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
SCAF4O95104 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.23□□□□□ -0.13
SCAF4O95104 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.23□□□□□ -0.13
SCAF4O95104 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.23□□□□□ -0.13
SCAF4O95104 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.23□□□□□ -0.13
SCAF4O95104 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.23□□□□□ -0.13
SCAF4O95104 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.23□□□□□ -0.13
SCAF4O95104 AC005363.2-201ENST00000618631 242 ntBASIC14.23□□□□□ -0.13
SCAF4O95104 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.23□□□□□ -0.13
SCAF4O95104 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.23□□□□□ -0.13
SCAF4O95104 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.23□□□□□ -0.13
SCAF4O95104 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SCAF4O95104 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SCAF4O95104 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SCAF4O95104 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.23□□□□□ -0.13
SCAF4O95104 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCAF4O95104 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.23□□□□□ -0.13
SCAF4O95104 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SCAF4O95104 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SCAF4O95104 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.22□□□□□ -0.13
SCAF4O95104 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.22□□□□□ -0.13
SCAF4O95104 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SCAF4O95104 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 AL603756.1-201ENST00000606511 2163 ntBASIC14.22□□□□□ -0.13
SCAF4O95104 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SCAF4O95104 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCAF4O95104 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.22□□□□□ -0.13
SCAF4O95104 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
SCAF4O95104 LIN28AP1-201ENST00000429574 405 ntBASIC14.22□□□□□ -0.13
SCAF4O95104 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.22□□□□□ -0.13
SCAF4O95104 AC007663.1-201ENST00000438948 1240 ntBASIC14.22□□□□□ -0.13
SCAF4O95104 ATP5G1P1-201ENST00000448724 379 ntBASIC14.22□□□□□ -0.13
SCAF4O95104 AP003041.3-201ENST00000527151 707 ntBASIC14.22□□□□□ -0.13
SCAF4O95104 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms