Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX2-2O95096 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX2-2O95096 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX2-2O95096 AC022211.2-201ENST00000585075 2527 ntBASIC15.96■□□□□ 0.14
NKX2-2O95096 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX2-2O95096 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX2-2O95096 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NKX2-2O95096 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.96■□□□□ 0.14
NKX2-2O95096 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
NKX2-2O95096 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NKX2-2O95096 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 NCF1C-201ENST00000438382 1427 ntBASIC15.95■□□□□ 0.14
NKX2-2O95096 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.95■□□□□ 0.14
NKX2-2O95096 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.95■□□□□ 0.14
NKX2-2O95096 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NKX2-2O95096 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.95■□□□□ 0.14
NKX2-2O95096 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
NKX2-2O95096 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.95■□□□□ 0.14
NKX2-2O95096 SCARNA2-201ENST00000458748 420 ntBASIC15.95■□□□□ 0.14
NKX2-2O95096 UNC93B7-201ENST00000509439 705 ntBASIC15.95■□□□□ 0.14
NKX2-2O95096 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NKX2-2O95096 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.95■□□□□ 0.14
NKX2-2O95096 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.95■□□□□ 0.14
NKX2-2O95096 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NKX2-2O95096 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.95■□□□□ 0.14
NKX2-2O95096 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NKX2-2O95096 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX2-2O95096 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NKX2-2O95096 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 FRMD8P1-201ENST00000440433 1524 ntBASIC15.94■□□□□ 0.14
NKX2-2O95096 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.94■□□□□ 0.14
NKX2-2O95096 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NKX2-2O95096 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX2-2O95096 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.94■□□□□ 0.14
NKX2-2O95096 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 DUSP5P1-201ENST00000441325 1139 ntBASIC15.94■□□□□ 0.14
NKX2-2O95096 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX2-2O95096 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.94■□□□□ 0.14
NKX2-2O95096 AC064862.7-201ENST00000604520 867 ntBASIC15.94■□□□□ 0.14
NKX2-2O95096 AL589182.2-201ENST00000619332 1049 ntBASIC15.94■□□□□ 0.14
NKX2-2O95096 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NKX2-2O95096 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.94■□□□□ 0.14
NKX2-2O95096 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.94■□□□□ 0.14
NKX2-2O95096 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX2-2O95096 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NKX2-2O95096 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX2-2O95096 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-2O95096 AD000864.1-201ENST00000624076 2295 ntBASIC15.93■□□□□ 0.14
NKX2-2O95096 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX2-2O95096 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-2O95096 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.93■□□□□ 0.14
NKX2-2O95096 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NKX2-2O95096 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-2O95096 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX2-2O95096 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX2-2O95096 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-2O95096 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-2O95096 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX2-2O95096 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
NKX2-2O95096 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-2O95096 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NKX2-2O95096 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NKX2-2O95096 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NKX2-2O95096 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.93■□□□□ 0.14
NKX2-2O95096 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.93■□□□□ 0.14
NKX2-2O95096 MTDHP4-201ENST00000600287 670 ntBASIC15.93■□□□□ 0.14
NKX2-2O95096 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX2-2O95096 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX2-2O95096 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms