Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM3O75382 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM3O75382 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TRIM3O75382 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM3O75382 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM3O75382 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 AC100803.2-201ENST00000562459 1963 ntBASIC16.18■□□□□ 0.18
TRIM3O75382 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
TRIM3O75382 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 AC026396.1-201ENST00000419388 421 ntBASIC16.18■□□□□ 0.18
TRIM3O75382 AC079781.3-201ENST00000449110 356 ntBASIC16.18■□□□□ 0.18
TRIM3O75382 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 AC122714.2-201ENST00000502787 707 ntBASIC16.18■□□□□ 0.18
TRIM3O75382 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 AL121912.1-201ENST00000603683 238 ntBASIC16.18■□□□□ 0.18
TRIM3O75382 AC116407.2-201ENST00000613639 860 ntBASIC16.18■□□□□ 0.18
TRIM3O75382 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 NKILA-202ENST00000614771 2598 ntBASIC16.18■□□□□ 0.18
TRIM3O75382 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM3O75382 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM3O75382 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM3O75382 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM3O75382 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM3O75382 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM3O75382 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM3O75382 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM3O75382 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM3O75382 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 COX5BP2-201ENST00000392354 334 ntBASIC16.17■□□□□ 0.18
TRIM3O75382 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 AC106795.1-205ENST00000512851 1056 ntBASIC16.17■□□□□ 0.18
TRIM3O75382 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.17■□□□□ 0.18
TRIM3O75382 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM3O75382 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM3O75382 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM3O75382 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM3O75382 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM3O75382 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM3O75382 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms