Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 DNAJB3-201ENST00000446806 729 ntBASIC21.55■■□□□ 1.04
CACNA1FO60840 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.55■■□□□ 1.04
CACNA1FO60840 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.55■■□□□ 1.04
CACNA1FO60840 AC092865.5-201ENST00000545435 363 ntBASIC21.55■■□□□ 1.04
CACNA1FO60840 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.55■■□□□ 1.04
CACNA1FO60840 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.55■■□□□ 1.04
CACNA1FO60840 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.55■■□□□ 1.04
CACNA1FO60840 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CACNA1FO60840 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.55■■□□□ 1.04
CACNA1FO60840 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.55■■□□□ 1.04
CACNA1FO60840 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.55■■□□□ 1.04
CACNA1FO60840 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CACNA1FO60840 AC092053.1-201ENST00000605787 1936 ntBASIC21.55■■□□□ 1.04
CACNA1FO60840 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CACNA1FO60840 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 AP001094.4-201ENST00000579008 2176 ntBASIC21.54■■□□□ 1.04
CACNA1FO60840 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CACNA1FO60840 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 RNU1-129P-201ENST00000384064 167 ntBASIC21.54■■□□□ 1.04
CACNA1FO60840 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.54■■□□□ 1.04
CACNA1FO60840 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.54■■□□□ 1.04
CACNA1FO60840 U1.21-201ENST00000580816 167 ntBASIC21.54■■□□□ 1.04
CACNA1FO60840 AL031055.1-201ENST00000606362 631 ntBASIC21.54■■□□□ 1.04
CACNA1FO60840 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.54■■□□□ 1.04
CACNA1FO60840 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.54■■□□□ 1.04
CACNA1FO60840 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.54■■□□□ 1.04
CACNA1FO60840 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CACNA1FO60840 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.54■■□□□ 1.04
CACNA1FO60840 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CACNA1FO60840 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.54■■□□□ 1.04
CACNA1FO60840 MIR4515-201ENST00000584082 81 ntBASIC21.54■■□□□ 1.04
CACNA1FO60840 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.54■■□□□ 1.04
CACNA1FO60840 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CACNA1FO60840 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CACNA1FO60840 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CACNA1FO60840 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.53■■□□□ 1.04
CACNA1FO60840 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.53■■□□□ 1.04
CACNA1FO60840 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.53■■□□□ 1.04
CACNA1FO60840 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.53■■□□□ 1.04
CACNA1FO60840 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.53■■□□□ 1.04
CACNA1FO60840 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.53■■□□□ 1.04
CACNA1FO60840 AL645728.2-201ENST00000641974 660 ntBASIC21.53■■□□□ 1.04
CACNA1FO60840 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CACNA1FO60840 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CACNA1FO60840 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.52■■□□□ 1.04
CACNA1FO60840 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CACNA1FO60840 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.52■■□□□ 1.04
CACNA1FO60840 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.52■■□□□ 1.04
CACNA1FO60840 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CACNA1FO60840 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.52■■□□□ 1.04
CACNA1FO60840 AC092068.3-201ENST00000587894 2016 ntBASIC21.52■■□□□ 1.04
CACNA1FO60840 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CACNA1FO60840 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.52■■□□□ 1.04
CACNA1FO60840 AP000344.2-201ENST00000512987 629 ntBASIC21.52■■□□□ 1.04
CACNA1FO60840 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.52■■□□□ 1.04
CACNA1FO60840 AC013467.2-201ENST00000605472 835 ntBASIC21.52■■□□□ 1.04
CACNA1FO60840 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CACNA1FO60840 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
CACNA1FO60840 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.51■■□□□ 1.03
CACNA1FO60840 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.51■■□□□ 1.03
CACNA1FO60840 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CACNA1FO60840 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.51■■□□□ 1.03
CACNA1FO60840 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CACNA1FO60840 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CACNA1FO60840 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CACNA1FO60840 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CACNA1FO60840 PMS2P4-201ENST00000412466 1052 ntBASIC21.51■■□□□ 1.03
CACNA1FO60840 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CACNA1FO60840 AC092902.6-201ENST00000641783 218 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms