Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.35■□□□□ 0.21
PLOD3O60568 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PLOD3O60568 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PLOD3O60568 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
PLOD3O60568 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.35■□□□□ 0.21
PLOD3O60568 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PLOD3O60568 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PLOD3O60568 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.34■□□□□ 0.21
PLOD3O60568 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 NUS1P1-201ENST00000446295 882 ntBASIC16.34■□□□□ 0.21
PLOD3O60568 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.34■□□□□ 0.21
PLOD3O60568 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.34■□□□□ 0.21
PLOD3O60568 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.34■□□□□ 0.21
PLOD3O60568 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PLOD3O60568 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PLOD3O60568 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.34■□□□□ 0.21
PLOD3O60568 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.34■□□□□ 0.21
PLOD3O60568 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PLOD3O60568 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PLOD3O60568 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PLOD3O60568 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PLOD3O60568 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PLOD3O60568 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PLOD3O60568 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PLOD3O60568 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.33■□□□□ 0.21
PLOD3O60568 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PLOD3O60568 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.33■□□□□ 0.21
PLOD3O60568 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PLOD3O60568 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PLOD3O60568 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PLOD3O60568 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PLOD3O60568 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.33■□□□□ 0.2
PLOD3O60568 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
PLOD3O60568 HCG4P8-203ENST00000443049 980 ntBASIC16.33■□□□□ 0.2
PLOD3O60568 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 KRT16P4-201ENST00000453883 522 ntBASIC16.33■□□□□ 0.2
PLOD3O60568 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.33■□□□□ 0.2
PLOD3O60568 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.33■□□□□ 0.2
PLOD3O60568 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.33■□□□□ 0.2
PLOD3O60568 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PLOD3O60568 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.33■□□□□ 0.2
PLOD3O60568 MIR5100-201ENST00000579544 119 ntBASIC16.33■□□□□ 0.2
PLOD3O60568 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.33■□□□□ 0.2
PLOD3O60568 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.33■□□□□ 0.2
PLOD3O60568 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
PLOD3O60568 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PLOD3O60568 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PLOD3O60568 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.33■□□□□ 0.2
PLOD3O60568 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PLOD3O60568 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PLOD3O60568 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PLOD3O60568 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms