Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
ITM2AO43736 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ITM2AO43736 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17■□□□□ 0.31
ITM2AO43736 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17■□□□□ 0.31
ITM2AO43736 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ITM2AO43736 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.99■□□□□ 0.31
ITM2AO43736 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ITM2AO43736 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 MIR662-201ENST00000384847 95 ntBASIC16.99■□□□□ 0.31
ITM2AO43736 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.99■□□□□ 0.31
ITM2AO43736 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.99■□□□□ 0.31
ITM2AO43736 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.99■□□□□ 0.31
ITM2AO43736 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.99■□□□□ 0.31
ITM2AO43736 ZNF444P1-201ENST00000559497 298 ntBASIC16.99■□□□□ 0.31
ITM2AO43736 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.99■□□□□ 0.31
ITM2AO43736 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ITM2AO43736 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.99■□□□□ 0.31
ITM2AO43736 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.99■□□□□ 0.31
ITM2AO43736 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.99■□□□□ 0.31
ITM2AO43736 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.99■□□□□ 0.31
ITM2AO43736 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ITM2AO43736 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITM2AO43736 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ITM2AO43736 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.98■□□□□ 0.31
ITM2AO43736 AC092364.2-201ENST00000596710 2692 ntBASIC16.98■□□□□ 0.31
ITM2AO43736 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.98■□□□□ 0.31
ITM2AO43736 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.98■□□□□ 0.31
ITM2AO43736 STARP1-201ENST00000397973 869 ntBASIC16.98■□□□□ 0.31
ITM2AO43736 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 AC010203.1-204ENST00000548782 407 ntBASIC16.98■□□□□ 0.31
ITM2AO43736 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.98■□□□□ 0.31
ITM2AO43736 AP006294.2-201ENST00000641667 209 ntBASIC16.98■□□□□ 0.31
ITM2AO43736 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
ITM2AO43736 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ITM2AO43736 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.98■□□□□ 0.31
ITM2AO43736 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.98■□□□□ 0.31
ITM2AO43736 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.98■□□□□ 0.31
ITM2AO43736 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ITM2AO43736 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
ITM2AO43736 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.97■□□□□ 0.31
ITM2AO43736 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.97■□□□□ 0.31
ITM2AO43736 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ITM2AO43736 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.97■□□□□ 0.31
ITM2AO43736 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
ITM2AO43736 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 MYCLP1-201ENST00000372451 1075 ntBASIC16.97■□□□□ 0.31
ITM2AO43736 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 FAM8A6P-201ENST00000407496 1135 ntBASIC16.97■□□□□ 0.31
ITM2AO43736 AC007967.3-201ENST00000434308 558 ntBASIC16.97■□□□□ 0.31
ITM2AO43736 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ITM2AO43736 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.97■□□□□ 0.31
ITM2AO43736 AC011558.1-201ENST00000623459 338 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms