Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ3O43525 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ3O43525 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ3O43525 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
KCNQ3O43525 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ3O43525 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
KCNQ3O43525 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.04■■□□□ 1.12
KCNQ3O43525 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.04■■□□□ 1.12
KCNQ3O43525 ACTG1P14-201ENST00000446382 1122 ntBASIC22.04■■□□□ 1.12
KCNQ3O43525 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.04■■□□□ 1.12
KCNQ3O43525 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ3O43525 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ3O43525 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ3O43525 AC093520.2-201ENST00000561830 333 ntBASIC22.04■■□□□ 1.12
KCNQ3O43525 AC022145.2-201ENST00000598203 171 ntBASIC22.04■■□□□ 1.12
KCNQ3O43525 AC093028.1-201ENST00000622998 982 ntBASIC22.04■■□□□ 1.12
KCNQ3O43525 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ3O43525 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ3O43525 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ3O43525 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ3O43525 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ3O43525 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ3O43525 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
KCNQ3O43525 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ3O43525 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ3O43525 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ3O43525 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ3O43525 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ3O43525 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC22.03■■□□□ 1.12
KCNQ3O43525 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ3O43525 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
KCNQ3O43525 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.03■■□□□ 1.12
KCNQ3O43525 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ3O43525 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
KCNQ3O43525 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.03■■□□□ 1.12
KCNQ3O43525 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.03■■□□□ 1.12
KCNQ3O43525 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.03■■□□□ 1.12
KCNQ3O43525 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.03■■□□□ 1.12
KCNQ3O43525 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
KCNQ3O43525 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC22.03■■□□□ 1.12
KCNQ3O43525 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC22.03■■□□□ 1.12
KCNQ3O43525 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
KCNQ3O43525 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
KCNQ3O43525 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ3O43525 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ3O43525 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ3O43525 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
KCNQ3O43525 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
KCNQ3O43525 AL121761.2-201ENST00000598007 1648 ntBASIC22.02■■□□□ 1.12
KCNQ3O43525 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ3O43525 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ3O43525 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ3O43525 AL133373.2-201ENST00000623187 2828 ntBASIC22.02■■□□□ 1.12
KCNQ3O43525 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ3O43525 HMGA1P7-201ENST00000406908 502 ntBASIC22.02■■□□□ 1.12
KCNQ3O43525 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ3O43525 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.02■■□□□ 1.12
KCNQ3O43525 CYMP-203ENST00000474680 1263 ntBASIC22.02■■□□□ 1.12
KCNQ3O43525 AP000344.2-201ENST00000512987 629 ntBASIC22.02■■□□□ 1.12
KCNQ3O43525 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ3O43525 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
KCNQ3O43525 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.02■■□□□ 1.12
KCNQ3O43525 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
KCNQ3O43525 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
KCNQ3O43525 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
KCNQ3O43525 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
KCNQ3O43525 AC020763.4-201ENST00000623414 4170 ntBASIC22.02■■□□□ 1.11
KCNQ3O43525 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ3O43525 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ3O43525 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ3O43525 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC22.01■■□□□ 1.11
KCNQ3O43525 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.01■■□□□ 1.11
KCNQ3O43525 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ3O43525 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ3O43525 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.01■■□□□ 1.11
KCNQ3O43525 NMU-203ENST00000507338 658 ntTSL 3 BASIC22.01■■□□□ 1.11
KCNQ3O43525 KRT8P48-201ENST00000515599 1220 ntBASIC22.01■■□□□ 1.11
KCNQ3O43525 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.01■■□□□ 1.11
KCNQ3O43525 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
KCNQ3O43525 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ3O43525 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ3O43525 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ3O43525 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC22.01■■□□□ 1.11
KCNQ3O43525 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.01■■□□□ 1.11
KCNQ3O43525 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ3O43525 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC22.01■■□□□ 1.11
KCNQ3O43525 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
KCNQ3O43525 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC22■■□□□ 1.11
KCNQ3O43525 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
KCNQ3O43525 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC22■■□□□ 1.11
KCNQ3O43525 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNQ3O43525 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC22■■□□□ 1.11
KCNQ3O43525 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22■■□□□ 1.11
KCNQ3O43525 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC22■■□□□ 1.11
KCNQ3O43525 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC22■■□□□ 1.11
KCNQ3O43525 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
KCNQ3O43525 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC22■■□□□ 1.11
KCNQ3O43525 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
KCNQ3O43525 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNQ3O43525 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms