Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.41■□□□□ 0.54
HOXA2O43364 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXA2O43364 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXA2O43364 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HOXA2O43364 AC009093.7-201ENST00000623853 1223 ntBASIC18.41■□□□□ 0.54
HOXA2O43364 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HOXA2O43364 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA2O43364 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA2O43364 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.41■□□□□ 0.54
HOXA2O43364 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.41■□□□□ 0.54
HOXA2O43364 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA2O43364 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA2O43364 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
HOXA2O43364 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.41■□□□□ 0.54
HOXA2O43364 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
HOXA2O43364 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
HOXA2O43364 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.41■□□□□ 0.54
HOXA2O43364 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA2O43364 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HOXA2O43364 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXA2O43364 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
HOXA2O43364 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXA2O43364 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXA2O43364 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXA2O43364 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HOXA2O43364 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HOXA2O43364 FAM86GP-201ENST00000448322 971 ntBASIC18.4■□□□□ 0.54
HOXA2O43364 AC067863.1-201ENST00000494933 530 ntBASIC18.4■□□□□ 0.54
HOXA2O43364 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXA2O43364 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXA2O43364 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXA2O43364 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.4■□□□□ 0.54
HOXA2O43364 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXA2O43364 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXA2O43364 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 AKAP8P1-201ENST00000434743 1349 ntBASIC18.4■□□□□ 0.54
HOXA2O43364 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXA2O43364 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.4■□□□□ 0.54
HOXA2O43364 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.4■□□□□ 0.54
HOXA2O43364 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HOXA2O43364 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HOXA2O43364 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HOXA2O43364 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.39■□□□□ 0.54
HOXA2O43364 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXA2O43364 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA2O43364 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA2O43364 AC005237.2-201ENST00000434368 219 ntBASIC18.39■□□□□ 0.53
HOXA2O43364 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXA2O43364 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXA2O43364 RARRES2P8-201ENST00000566335 367 ntBASIC18.39■□□□□ 0.53
HOXA2O43364 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA2O43364 AL589935.2-201ENST00000616471 1231 ntBASIC18.39■□□□□ 0.53
HOXA2O43364 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HOXA2O43364 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA2O43364 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA2O43364 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HOXA2O43364 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.39■□□□□ 0.53
HOXA2O43364 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
HOXA2O43364 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
HOXA2O43364 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA2O43364 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.39■□□□□ 0.53
HOXA2O43364 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA2O43364 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXA2O43364 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 AC104581.1-202ENST00000635932 2618 ntBASIC18.38■□□□□ 0.53
HOXA2O43364 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXA2O43364 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
HOXA2O43364 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
HOXA2O43364 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HOXA2O43364 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HOXA2O43364 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.38■□□□□ 0.53
HOXA2O43364 TFAMP1-201ENST00000412727 736 ntBASIC18.38■□□□□ 0.53
HOXA2O43364 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.38■□□□□ 0.53
HOXA2O43364 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA2O43364 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA2O43364 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.38■□□□□ 0.53
HOXA2O43364 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXA2O43364 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXA2O43364 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXA2O43364 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXA2O43364 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HOXA2O43364 AC015911.4-201ENST00000588022 1070 ntBASIC18.38■□□□□ 0.53
HOXA2O43364 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms