Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 HMGA1P5-201ENST00000412453 271 ntBASIC11.88□□□□□ -0.51
NDUFA1O15239 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.88□□□□□ -0.51
NDUFA1O15239 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.88□□□□□ -0.51
NDUFA1O15239 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
NDUFA1O15239 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.88□□□□□ -0.51
NDUFA1O15239 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 LYSMD4-203ENST00000378904 2122 ntBASIC11.87□□□□□ -0.51
NDUFA1O15239 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
NDUFA1O15239 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
NDUFA1O15239 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
NDUFA1O15239 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
NDUFA1O15239 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 LINC02012-201ENST00000608206 1725 ntBASIC11.87□□□□□ -0.51
NDUFA1O15239 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFA1O15239 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC11.87□□□□□ -0.51
NDUFA1O15239 SEC1P-202ENST00000473944 940 ntBASIC11.87□□□□□ -0.51
NDUFA1O15239 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFA1O15239 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.87□□□□□ -0.51
NDUFA1O15239 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
NDUFA1O15239 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
NDUFA1O15239 AL355075.4-201ENST00000554988 638 ntBASIC11.87□□□□□ -0.51
NDUFA1O15239 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.87□□□□□ -0.51
NDUFA1O15239 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.87□□□□□ -0.51
NDUFA1O15239 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC11.87□□□□□ -0.51
NDUFA1O15239 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC11.87□□□□□ -0.51
NDUFA1O15239 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.87□□□□□ -0.51
NDUFA1O15239 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 AC092068.3-201ENST00000587894 2016 ntBASIC11.87□□□□□ -0.51
NDUFA1O15239 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 AL513477.1-201ENST00000602865 2407 ntBASIC11.87□□□□□ -0.51
NDUFA1O15239 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NDUFA1O15239 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NDUFA1O15239 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.87□□□□□ -0.51
NDUFA1O15239 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NDUFA1O15239 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.86□□□□□ -0.51
NDUFA1O15239 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms