Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC23.7■■□□□ 1.39
CHD2O14647 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CHD2O14647 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CHD2O14647 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CHD2O14647 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CHD2O14647 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC23.7■■□□□ 1.38
CHD2O14647 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
CHD2O14647 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CHD2O14647 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.7■■□□□ 1.38
CHD2O14647 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD2O14647 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
CHD2O14647 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD2O14647 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC23.7■■□□□ 1.38
CHD2O14647 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC23.7■■□□□ 1.38
CHD2O14647 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
CHD2O14647 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD2O14647 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD2O14647 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD2O14647 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHD2O14647 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHD2O14647 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC23.7■■□□□ 1.38
CHD2O14647 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
CHD2O14647 LINC00895-201ENST00000629028 1637 ntBASIC23.69■■□□□ 1.38
CHD2O14647 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CHD2O14647 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC23.69■■□□□ 1.38
CHD2O14647 POLE2-203ENST00000553805 496 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD2O14647 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD2O14647 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CHD2O14647 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD2O14647 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.69■■□□□ 1.38
CHD2O14647 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD2O14647 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC23.69■■□□□ 1.38
CHD2O14647 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD2O14647 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC23.68■■□□□ 1.38
CHD2O14647 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD2O14647 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD2O14647 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC23.68■■□□□ 1.38
CHD2O14647 SLC25A1P3-201ENST00000395415 828 ntBASIC23.68■■□□□ 1.38
CHD2O14647 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC23.68■■□□□ 1.38
CHD2O14647 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD2O14647 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD2O14647 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC23.68■■□□□ 1.38
CHD2O14647 AC104794.3-201ENST00000566840 1248 ntBASIC23.68■■□□□ 1.38
CHD2O14647 AC003101.2-201ENST00000612557 442 ntBASIC23.68■■□□□ 1.38
CHD2O14647 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD2O14647 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CHD2O14647 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CHD2O14647 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD2O14647 PP14571-201ENST00000404327 934 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD2O14647 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC23.68■■□□□ 1.38
CHD2O14647 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD2O14647 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.67■■□□□ 1.38
CHD2O14647 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC23.67■■□□□ 1.38
CHD2O14647 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD2O14647 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC23.67■■□□□ 1.38
CHD2O14647 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD2O14647 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
CHD2O14647 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHD2O14647 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD2O14647 AC087499.5-201ENST00000452760 1342 ntBASIC23.67■■□□□ 1.38
CHD2O14647 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CHD2O14647 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CHD2O14647 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD2O14647 AP006294.1-201ENST00000415407 339 ntBASIC23.67■■□□□ 1.38
CHD2O14647 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CHD2O14647 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC23.67■■□□□ 1.38
CHD2O14647 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CHD2O14647 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
CHD2O14647 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC23.67■■□□□ 1.38
CHD2O14647 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CHD2O14647 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CHD2O14647 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHD2O14647 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD2O14647 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.67■■□□□ 1.38
CHD2O14647 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC23.67■■□□□ 1.38
CHD2O14647 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD2O14647 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CHD2O14647 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC23.66■■□□□ 1.38
CHD2O14647 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC23.66■■□□□ 1.38
CHD2O14647 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD2O14647 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD2O14647 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC23.66■■□□□ 1.38
CHD2O14647 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD2O14647 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 AL391825.1-201ENST00000457671 1364 ntBASIC23.66■■□□□ 1.38
CHD2O14647 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 HARS-204ENST00000438307 1789 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD2O14647 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CHD2O14647 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 INE1-201ENST00000456273 945 ntBASIC23.66■■□□□ 1.38
CHD2O14647 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD2O14647 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms