Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 COX5BP2-201ENST00000392354 334 ntBASIC12.21□□□□□ -0.45
LINC01546A6NGU7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 RN7SL471P-201ENST00000580476 299 ntBASIC12.21□□□□□ -0.45
LINC01546A6NGU7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 GPR89P-201ENST00000407924 1495 ntBASIC12.21□□□□□ -0.46
LINC01546A6NGU7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LINC01546A6NGU7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 AP005117.1-202ENST00000581724 1908 ntBASIC12.2□□□□□ -0.46
LINC01546A6NGU7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 NUDT16P1-203ENST00000513809 620 ntBASIC12.2□□□□□ -0.46
LINC01546A6NGU7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC01546A6NGU7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 AC013268.4-201ENST00000637413 2228 ntBASIC12.19□□□□□ -0.46
LINC01546A6NGU7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 AC002310.6-201ENST00000624451 1377 ntBASIC12.19□□□□□ -0.46
LINC01546A6NGU7 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.19□□□□□ -0.46
LINC01546A6NGU7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.19□□□□□ -0.46
LINC01546A6NGU7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LINC01546A6NGU7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms