Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV3S1A0A5B6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
TCRBV3S1A0A5B6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.21■□□□□ 0.18
TCRBV3S1A0A5B6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TCRBV3S1A0A5B6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCRBV3S1A0A5B6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
TCRBV3S1A0A5B6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TCRBV3S1A0A5B6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCRBV3S1A0A5B6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 RBM17P1-201ENST00000453646 1190 ntBASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 FITM1-202ENST00000559294 800 ntBASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 AP001412.1-201ENST00000608405 714 ntBASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 AC019129.2-201ENST00000609837 1235 ntBASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 AL049637.2-201ENST00000641778 930 ntBASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 AC092384.3-202ENST00000564646 2873 ntBASIC16.2■□□□□ 0.18
TCRBV3S1A0A5B6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 OR6D1P-203ENST00000641209 4860 ntBASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 AC005052.1-201ENST00000625181 2492 ntBASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 UNC93B2-201ENST00000285383 730 ntBASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 AC012618.2-201ENST00000428058 849 ntBASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 AP002490.2-201ENST00000524791 560 ntBASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 AC233702.5-201ENST00000584107 538 ntBASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 AC097374.2-201ENST00000618617 1306 ntBASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms