Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 AC004877.2-201ENST00000623941 599 ntBASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 AC007064.4-201ENST00000637740 555 ntBASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.49■□□□□ 0.07
TRGV5A0A0B4J1U4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 BCAR1-209ENST00000546196 1340 ntBASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 AL513190.1-201ENST00000621254 727 ntBASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 AC079781.4-201ENST00000641908 219 ntBASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 NEFHP1-201ENST00000412845 2629 ntBASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV5A0A0B4J1U4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 AC008764.6-201ENST00000595909 2069 ntBASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 PAWRP1-201ENST00000451083 565 ntBASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 CXCL1P1-201ENST00000502804 216 ntBASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 AC005829.1-201ENST00000570002 483 ntBASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRGV5A0A0B4J1U4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 NOC2LP1-202ENST00000452600 2235 ntBASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV5A0A0B4J1U4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms