Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 AL009183.1-201ENST00000603760 355 ntBASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 AC093503.3-201ENST00000624917 2352 ntBASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 AC073592.3-201ENST00000625118 1834 ntBASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTCH2Q9Y6C5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 AL135999.2-201ENST00000622438 1686 ntBASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 AC093677.2-201ENST00000600169 1863 ntBASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTCH2Q9Y6C5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 AL096828.2-201ENST00000567259 1965 ntBASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTCH2Q9Y6C5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 AL138781.2-201ENST00000617896 1843 ntBASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms