Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 AC139713.2-201ENST00000641328 2723 ntBASIC21.06■□□□□ 0.96
HMG20BQ9P0W2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 AL590787.1-201ENST00000568856 1315 ntBASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 AL645608.8-201ENST00000606034 2086 ntBASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMG20BQ9P0W2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 AL591424.1-201ENST00000442569 1213 ntBASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 KRT18P3-201ENST00000451602 1288 ntBASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 AC141586.5-201ENST00000624546 2050 ntBASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 AC090340.1-201ENST00000620778 4980 ntBASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMG20BQ9P0W2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMG20BQ9P0W2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms