Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.57■□□□□ 0.4
NCKIPSDQ9NZQ3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 IL9RP2-201ENST00000423948 1312 ntBASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 CROCCP2-202ENST00000412962 2773 ntBASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 RCN1P2-201ENST00000398357 915 ntBASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 KRT18P65-201ENST00000439811 1286 ntBASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 MTCL1P1-201ENST00000446207 792 ntBASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NCKIPSDQ9NZQ3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 RNPS1P1-201ENST00000507437 918 ntBASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 AC005336.2-201ENST00000593183 939 ntBASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NCKIPSDQ9NZQ3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 AC124067.4-201ENST00000519691 2379 ntBASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 RNA5SP419-201ENST00000515908 135 ntBASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 AC011467.2-201ENST00000598425 242 ntBASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 AL138831.2-201ENST00000606564 490 ntBASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 AC009949.1-201ENST00000623048 1830 ntBASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCKIPSDQ9NZQ3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms