Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 HTR5BP-201ENST00000430851 1154 ntBASIC20.78■□□□□ 0.92
SALL1Q9NSC2 DNAJB3-202ENST00000449667 1266 ntBASIC20.78■□□□□ 0.92
SALL1Q9NSC2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
SALL1Q9NSC2 AC023141.13-201ENST00000604991 943 ntBASIC20.78■□□□□ 0.92
SALL1Q9NSC2 ACTL9-202ENST00000612068 1252 ntBASIC20.78■□□□□ 0.92
SALL1Q9NSC2 AC007064.4-201ENST00000637740 555 ntBASIC20.78■□□□□ 0.92
SALL1Q9NSC2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SALL1Q9NSC2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.77■□□□□ 0.92
SALL1Q9NSC2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SALL1Q9NSC2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SALL1Q9NSC2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SALL1Q9NSC2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SALL1Q9NSC2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SALL1Q9NSC2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SALL1Q9NSC2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SALL1Q9NSC2 AC025580.3-201ENST00000617932 1424 ntBASIC20.77■□□□□ 0.91
SALL1Q9NSC2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SALL1Q9NSC2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SALL1Q9NSC2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.77■□□□□ 0.91
SALL1Q9NSC2 MIR4469-201ENST00000583919 79 ntBASIC20.77■□□□□ 0.91
SALL1Q9NSC2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.77■□□□□ 0.91
SALL1Q9NSC2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SALL1Q9NSC2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL1Q9NSC2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 ELL2P1-201ENST00000413990 1906 ntBASIC20.75■□□□□ 0.91
SALL1Q9NSC2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 AC074386.1-202ENST00000463561 864 ntBASIC20.75■□□□□ 0.91
SALL1Q9NSC2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL1Q9NSC2 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.75■□□□□ 0.91
SALL1Q9NSC2 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.74■□□□□ 0.91
SALL1Q9NSC2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms