Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 IFNL4P1-201ENST00000607083 540 ntBASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
NECTIN3Q9NQS3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NECTIN3Q9NQS3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 FAM220CP-201ENST00000395253 831 ntBASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 DDX43P3-201ENST00000441064 443 ntBASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms