Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
UPF2Q9HAU5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPF2Q9HAU5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.29■■□□□ 1
UPF2Q9HAU5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC21.29■■□□□ 1
UPF2Q9HAU5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.29■■□□□ 1
UPF2Q9HAU5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.29■■□□□ 1
UPF2Q9HAU5 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.29■■□□□ 1
UPF2Q9HAU5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
UPF2Q9HAU5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC21.29■■□□□ 1
UPF2Q9HAU5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.29■■□□□ 1
UPF2Q9HAU5 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.29■■□□□ 1
UPF2Q9HAU5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
UPF2Q9HAU5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.29■■□□□ 1
UPF2Q9HAU5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.29■■□□□ 1
UPF2Q9HAU5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
UPF2Q9HAU5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.29■■□□□ 1
UPF2Q9HAU5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.28■■□□□ 1
UPF2Q9HAU5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
UPF2Q9HAU5 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.28■■□□□ 1
UPF2Q9HAU5 AC008894.3-201ENST00000624324 3103 ntBASIC21.28■■□□□ 1
UPF2Q9HAU5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.28■■□□□ 1
UPF2Q9HAU5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.28■■□□□ 1
UPF2Q9HAU5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.28■■□□□ 1
UPF2Q9HAU5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
UPF2Q9HAU5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.28■■□□□ 1
UPF2Q9HAU5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 NAPSB-206ENST00000562112 1266 ntBASIC21.28■■□□□ 1
UPF2Q9HAU5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.28■■□□□ 1
UPF2Q9HAU5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.28■■□□□ 1
UPF2Q9HAU5 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.28■■□□□ 1
UPF2Q9HAU5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.28■■□□□ 1
UPF2Q9HAU5 AC004263.2-201ENST00000617183 678 ntBASIC21.28■■□□□ 1
UPF2Q9HAU5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.28■■□□□ 1
UPF2Q9HAU5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
UPF2Q9HAU5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC21.28■■□□□ 1
UPF2Q9HAU5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.28■■□□□ 1
UPF2Q9HAU5 AC092053.1-201ENST00000605787 1936 ntBASIC21.27■■□□□ 1
UPF2Q9HAU5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.27■■□□□ 1
UPF2Q9HAU5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
UPF2Q9HAU5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.27■■□□□ 1
UPF2Q9HAU5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
UPF2Q9HAU5 AL139384.1-201ENST00000612143 3047 ntBASIC21.27■■□□□ 1
UPF2Q9HAU5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.27■■□□□ 1
UPF2Q9HAU5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
UPF2Q9HAU5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
UPF2Q9HAU5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.27■■□□□ 1
UPF2Q9HAU5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
UPF2Q9HAU5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
UPF2Q9HAU5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.27■■□□□ 1
UPF2Q9HAU5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
UPF2Q9HAU5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
UPF2Q9HAU5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UPF2Q9HAU5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
UPF2Q9HAU5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
UPF2Q9HAU5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.27■□□□□ 0.99
UPF2Q9HAU5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
UPF2Q9HAU5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
UPF2Q9HAU5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms