Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 MIR1224-201ENST00000408193 85 ntBASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC40Q9H9A6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 AL135999.2-201ENST00000622438 1686 ntBASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 AC011676.5-201ENST00000624864 2660 ntBASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC40Q9H9A6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 AC060834.1-201ENST00000443027 2032 ntBASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 PMPCAP1-201ENST00000508114 1576 ntBASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 AC099336.1-202ENST00000602961 463 ntBASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC40Q9H9A6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC40Q9H9A6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC40Q9H9A6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms