Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX6-2Q9C056 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 NBPF21P-201ENST00000425093 1451 ntBASIC14.06□□□□□ -0.16
NKX6-2Q9C056 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 AC097658.1-201ENST00000475555 843 ntBASIC14.06□□□□□ -0.16
NKX6-2Q9C056 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.06□□□□□ -0.16
NKX6-2Q9C056 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 RNF216P1-203ENST00000404404 2427 ntBASIC14.06□□□□□ -0.16
NKX6-2Q9C056 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX6-2Q9C056 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 Z85996.1-201ENST00000494644 937 ntBASIC14.05□□□□□ -0.16
NKX6-2Q9C056 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX6-2Q9C056 AC087623.3-201ENST00000607047 1098 ntBASIC14.05□□□□□ -0.16
NKX6-2Q9C056 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms