Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 AC087641.1-201ENST00000557561 1021 ntBASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.27■■□□□ 1.16
PCDH11XQ9BZA7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
PCDH11XQ9BZA7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
PCDH11XQ9BZA7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AC009113.1-201ENST00000570267 2443 ntBASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AL353732.1-201ENST00000569618 1459 ntBASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AC236430.1-201ENST00000402231 743 ntBASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AC002472.2-201ENST00000442739 958 ntBASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AF228730.6-201ENST00000641497 218 ntBASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AC084121.3-201ENST00000641716 218 ntBASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 AC105233.6-201ENST00000642093 218 ntBASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH11XQ9BZA7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 UXT-AS1-201ENST00000590504 1525 ntBASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 MIR661-201ENST00000384842 89 ntBASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 SPDYE7P-202ENST00000420373 878 ntBASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 AC008677.1-201ENST00000519230 1561 ntBASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PCDH11XQ9BZA7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 FO538757.1-201ENST00000623083 1397 ntBASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 ABALON-201ENST00000629058 1903 ntBASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH11XQ9BZA7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms