Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 MIR600HG-201ENST00000449175 5984 ntBASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHRDL1Q9BU40 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 AC112698.1-201ENST00000510299 916 ntBASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHRDL1Q9BU40 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 AL138688.1-201ENST00000624851 1594 ntBASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRDL1Q9BU40 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 PP12613-201ENST00000424958 2230 ntBASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 AL645929.1-201ENST00000420084 975 ntBASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.8□□□□□ -0.2
CHRDL1Q9BU40 AC068472.1-201ENST00000474589 881 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms