Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD9AQ99638 SPDYE14P-201ENST00000442619 822 ntBASIC18.37■□□□□ 0.53
RAD9AQ99638 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD9AQ99638 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.37■□□□□ 0.53
RAD9AQ99638 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.37■□□□□ 0.53
RAD9AQ99638 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.37■□□□□ 0.53
RAD9AQ99638 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.37■□□□□ 0.53
RAD9AQ99638 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.37■□□□□ 0.53
RAD9AQ99638 KRT18P55-202ENST00000578578 1546 ntBASIC18.37■□□□□ 0.53
RAD9AQ99638 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD9AQ99638 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD9AQ99638 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.37■□□□□ 0.53
RAD9AQ99638 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD9AQ99638 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD9AQ99638 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD9AQ99638 REXO1L9P-201ENST00000604264 2108 ntBASIC18.37■□□□□ 0.53
RAD9AQ99638 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD9AQ99638 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RAD9AQ99638 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD9AQ99638 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.36■□□□□ 0.53
RAD9AQ99638 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAD9AQ99638 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAD9AQ99638 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.36■□□□□ 0.53
RAD9AQ99638 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.36■□□□□ 0.53
RAD9AQ99638 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.36■□□□□ 0.53
RAD9AQ99638 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.36■□□□□ 0.53
RAD9AQ99638 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.36■□□□□ 0.53
RAD9AQ99638 AC097493.3-201ENST00000509725 367 ntBASIC18.36■□□□□ 0.53
RAD9AQ99638 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.36■□□□□ 0.53
RAD9AQ99638 AC069120.2-201ENST00000524091 540 ntBASIC18.36■□□□□ 0.53
RAD9AQ99638 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAD9AQ99638 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.36■□□□□ 0.53
RAD9AQ99638 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD9AQ99638 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.36■□□□□ 0.53
RAD9AQ99638 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RAD9AQ99638 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.35■□□□□ 0.53
RAD9AQ99638 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAD9AQ99638 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.35■□□□□ 0.53
RAD9AQ99638 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAD9AQ99638 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RAD9AQ99638 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAD9AQ99638 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.35■□□□□ 0.53
RAD9AQ99638 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
RAD9AQ99638 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD9AQ99638 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.35■□□□□ 0.53
RAD9AQ99638 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD9AQ99638 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD9AQ99638 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.35■□□□□ 0.53
RAD9AQ99638 AP005018.1-201ENST00000525475 301 ntBASIC18.35■□□□□ 0.53
RAD9AQ99638 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RAD9AQ99638 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.35■□□□□ 0.53
RAD9AQ99638 AC005412.3-201ENST00000580309 715 ntBASIC18.35■□□□□ 0.53
RAD9AQ99638 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 AC027307.3-201ENST00000594262 1100 ntBASIC18.35■□□□□ 0.53
RAD9AQ99638 AL009183.1-201ENST00000603760 355 ntBASIC18.35■□□□□ 0.53
RAD9AQ99638 AL358472.5-202ENST00000641448 1267 ntBASIC18.35■□□□□ 0.53
RAD9AQ99638 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.35■□□□□ 0.53
RAD9AQ99638 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAD9AQ99638 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAD9AQ99638 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.35■□□□□ 0.53
RAD9AQ99638 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD9AQ99638 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD9AQ99638 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.34■□□□□ 0.53
RAD9AQ99638 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.34■□□□□ 0.53
RAD9AQ99638 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.34■□□□□ 0.53
RAD9AQ99638 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RAD9AQ99638 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RAD9AQ99638 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.34■□□□□ 0.53
RAD9AQ99638 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms