Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRGV9Q99603 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRGV9Q99603 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRGV9Q99603 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRGV9Q99603 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRGV9Q99603 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.52□□□□□ -0.25
TRGV9Q99603 AC092647.4-201ENST00000457211 535 ntBASIC13.52□□□□□ -0.25
TRGV9Q99603 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.52□□□□□ -0.25
TRGV9Q99603 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.52□□□□□ -0.25
TRGV9Q99603 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.52□□□□□ -0.25
TRGV9Q99603 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.52□□□□□ -0.25
TRGV9Q99603 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.52□□□□□ -0.25
TRGV9Q99603 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.52□□□□□ -0.25
TRGV9Q99603 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRGV9Q99603 AL049757.1-201ENST00000616842 1596 ntBASIC13.52□□□□□ -0.25
TRGV9Q99603 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.52□□□□□ -0.25
TRGV9Q99603 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRGV9Q99603 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.52□□□□□ -0.25
TRGV9Q99603 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
TRGV9Q99603 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.52□□□□□ -0.25
TRGV9Q99603 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.52□□□□□ -0.25
TRGV9Q99603 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRGV9Q99603 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRGV9Q99603 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV9Q99603 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRGV9Q99603 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.51□□□□□ -0.25
TRGV9Q99603 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV9Q99603 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRGV9Q99603 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.51□□□□□ -0.25
TRGV9Q99603 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV9Q99603 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRGV9Q99603 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV9Q99603 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRGV9Q99603 FAM220CP-201ENST00000395253 831 ntBASIC13.51□□□□□ -0.25
TRGV9Q99603 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.51□□□□□ -0.25
TRGV9Q99603 AK4P3-201ENST00000418260 669 ntBASIC13.51□□□□□ -0.25
TRGV9Q99603 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRGV9Q99603 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.51□□□□□ -0.25
TRGV9Q99603 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.51□□□□□ -0.25
TRGV9Q99603 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.51□□□□□ -0.25
TRGV9Q99603 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.51□□□□□ -0.25
TRGV9Q99603 AL353801.3-201ENST00000609898 542 ntBASIC13.51□□□□□ -0.25
TRGV9Q99603 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.51□□□□□ -0.25
TRGV9Q99603 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRGV9Q99603 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
TRGV9Q99603 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 PCDHB19P-201ENST00000570871 2371 ntBASIC13.51□□□□□ -0.25
TRGV9Q99603 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV9Q99603 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV9Q99603 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRGV9Q99603 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.5□□□□□ -0.25
TRGV9Q99603 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV9Q99603 AL603756.1-201ENST00000606511 2163 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms