Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC010653.2-201ENST00000623505 997 ntBASIC14.09□□□□□ -0.15
RAB40CQ96S21 KRT89P-201ENST00000620027 1478 ntBASIC14.09□□□□□ -0.15
RAB40CQ96S21 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB40CQ96S21 AC092068.3-201ENST00000587894 2016 ntBASIC14.08□□□□□ -0.15
RAB40CQ96S21 AC063926.3-201ENST00000624734 5658 ntBASIC14.08□□□□□ -0.15
RAB40CQ96S21 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB40CQ96S21 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB40CQ96S21 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB40CQ96S21 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
RAB40CQ96S21 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RAB40CQ96S21 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RAB40CQ96S21 KRT8P9-201ENST00000558927 1449 ntBASIC14.08□□□□□ -0.15
RAB40CQ96S21 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 UNC93B2-201ENST00000285383 730 ntBASIC14.08□□□□□ -0.16
RAB40CQ96S21 AC007663.1-201ENST00000438948 1240 ntBASIC14.08□□□□□ -0.16
RAB40CQ96S21 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40CQ96S21 AC002558.1-201ENST00000488906 803 ntBASIC14.08□□□□□ -0.16
RAB40CQ96S21 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 MIR4497-201ENST00000583208 89 ntBASIC14.08□□□□□ -0.16
RAB40CQ96S21 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RAB40CQ96S21 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 AC066615.1-201ENST00000640911 628 ntBASIC14.08□□□□□ -0.16
RAB40CQ96S21 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RAB40CQ96S21 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
RAB40CQ96S21 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
RAB40CQ96S21 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
RAB40CQ96S21 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB40CQ96S21 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40CQ96S21 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 AC092053.1-201ENST00000605787 1936 ntBASIC14.07□□□□□ -0.16
RAB40CQ96S21 AC022188.1-201ENST00000620960 1664 ntBASIC14.07□□□□□ -0.16
RAB40CQ96S21 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 AC093827.2-201ENST00000512654 315 ntBASIC14.07□□□□□ -0.16
RAB40CQ96S21 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 AC009154.2-201ENST00000621177 724 ntBASIC14.07□□□□□ -0.16
RAB40CQ96S21 RNF216P1-203ENST00000404404 2427 ntBASIC14.07□□□□□ -0.16
RAB40CQ96S21 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40CQ96S21 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40CQ96S21 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms