Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 PRELID1P1-202ENST00000567272 903 ntBASIC20.51■□□□□ 0.87
NEK1Q96PY6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 AD000864.1-201ENST00000624076 2295 ntBASIC20.51■□□□□ 0.87
NEK1Q96PY6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEK1Q96PY6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEK1Q96PY6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 AC004817.3-201ENST00000602957 2129 ntBASIC20.5■□□□□ 0.87
NEK1Q96PY6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEK1Q96PY6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEK1Q96PY6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEK1Q96PY6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 AC091304.2-201ENST00000564639 760 ntBASIC20.5■□□□□ 0.87
NEK1Q96PY6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEK1Q96PY6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEK1Q96PY6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 EGFEM1P-202ENST00000431685 1563 ntBASIC20.5■□□□□ 0.87
NEK1Q96PY6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEK1Q96PY6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.5■□□□□ 0.87
NEK1Q96PY6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 AL121761.2-201ENST00000598007 1648 ntBASIC20.49■□□□□ 0.87
NEK1Q96PY6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 AC026396.1-201ENST00000419388 421 ntBASIC20.49■□□□□ 0.87
NEK1Q96PY6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 AC012313.10-201ENST00000623509 926 ntBASIC20.49■□□□□ 0.87
NEK1Q96PY6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.49■□□□□ 0.87
NEK1Q96PY6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK1Q96PY6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEK1Q96PY6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NEK1Q96PY6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms