Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 IGHV3-42-201ENST00000520410 361 ntBASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 DUX4L17-201ENST00000557360 1267 ntBASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 AC027307.3-201ENST00000594262 1100 ntBASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 LINC02560-201ENST00000596379 459 ntBASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 AL158211.3-201ENST00000607385 239 ntBASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 BX323043.1-201ENST00000641006 1765 ntBASIC17.84■□□□□ 0.45
NECTIN4Q96NY8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.83■□□□□ 0.45
NECTIN4Q96NY8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
NECTIN4Q96NY8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.83■□□□□ 0.45
NECTIN4Q96NY8 FO538757.1-201ENST00000623083 1397 ntBASIC17.83■□□□□ 0.45
NECTIN4Q96NY8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 SPCS2P4-201ENST00000436160 681 ntBASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 SLC25A39P2-201ENST00000537614 270 ntBASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.83■□□□□ 0.44
NECTIN4Q96NY8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 AC120498.9-201ENST00000339021 3867 ntBASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 TREML5P-201ENST00000421694 576 ntBASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 AC026150.2-201ENST00000564693 1156 ntBASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 AL390754.1-201ENST00000619088 582 ntBASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.82■□□□□ 0.44
NECTIN4Q96NY8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 AC005332.8-201ENST00000622750 2735 ntBASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 MIR661-201ENST00000384842 89 ntBASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 HLA-J-202ENST00000469281 1241 ntBASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 AC107918.2-201ENST00000530817 355 ntBASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.81■□□□□ 0.44
NECTIN4Q96NY8 AC084121.4-201ENST00000641598 221 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms