Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 AC008494.3-201ENST00000606615 944 ntBASIC18.62■□□□□ 0.57
ALPK3Q96L96 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 AC016027.1-202ENST00000607927 1699 ntBASIC18.62■□□□□ 0.57
ALPK3Q96L96 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 AC087289.5-201ENST00000586076 3175 ntBASIC18.62■□□□□ 0.57
ALPK3Q96L96 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.62■□□□□ 0.57
ALPK3Q96L96 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALPK3Q96L96 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.61■□□□□ 0.57
ALPK3Q96L96 AC105233.2-201ENST00000523697 349 ntBASIC18.61■□□□□ 0.57
ALPK3Q96L96 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 AF228730.5-201ENST00000530288 346 ntBASIC18.61■□□□□ 0.57
ALPK3Q96L96 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 ANKRD19P-201ENST00000338192 862 ntBASIC18.61■□□□□ 0.57
ALPK3Q96L96 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 AL353779.1-201ENST00000434793 351 ntBASIC18.61■□□□□ 0.57
ALPK3Q96L96 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALPK3Q96L96 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.61■□□□□ 0.57
ALPK3Q96L96 MIR4538-201ENST00000581377 78 ntBASIC18.61■□□□□ 0.57
ALPK3Q96L96 AC003101.2-201ENST00000612557 442 ntBASIC18.61■□□□□ 0.57
ALPK3Q96L96 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALPK3Q96L96 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALPK3Q96L96 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALPK3Q96L96 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALPK3Q96L96 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALPK3Q96L96 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALPK3Q96L96 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALPK3Q96L96 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.6■□□□□ 0.57
ALPK3Q96L96 AL133338.1-201ENST00000565695 1517 ntBASIC18.6■□□□□ 0.57
ALPK3Q96L96 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALPK3Q96L96 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALPK3Q96L96 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALPK3Q96L96 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALPK3Q96L96 SPDYE18-201ENST00000510091 1050 ntBASIC18.59■□□□□ 0.57
ALPK3Q96L96 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 FAM8A2P-201ENST00000528813 1142 ntBASIC18.59■□□□□ 0.57
ALPK3Q96L96 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 RARRES2P9-201ENST00000565168 469 ntBASIC18.59■□□□□ 0.57
ALPK3Q96L96 AL138918.1-201ENST00000568306 659 ntBASIC18.59■□□□□ 0.57
ALPK3Q96L96 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 AC018529.1-201ENST00000613063 361 ntBASIC18.59■□□□□ 0.57
ALPK3Q96L96 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALPK3Q96L96 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.59■□□□□ 0.57
ALPK3Q96L96 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms