Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 AC004817.3-201ENST00000602957 2129 ntBASIC13.54□□□□□ -0.24
RAX2Q96IS3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 MIR574-201ENST00000385209 96 ntBASIC13.54□□□□□ -0.24
RAX2Q96IS3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 PMS2P1-201ENST00000431037 1228 ntBASIC13.54□□□□□ -0.24
RAX2Q96IS3 AC092910.1-201ENST00000482027 1129 ntBASIC13.54□□□□□ -0.24
RAX2Q96IS3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 AC008735.5-201ENST00000623544 497 ntBASIC13.54□□□□□ -0.24
RAX2Q96IS3 AC073592.4-201ENST00000623827 446 ntBASIC13.54□□□□□ -0.24
RAX2Q96IS3 AC107918.4-202ENST00000641623 219 ntBASIC13.54□□□□□ -0.24
RAX2Q96IS3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAX2Q96IS3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RAX2Q96IS3 AL049757.1-201ENST00000616842 1596 ntBASIC13.54□□□□□ -0.24
RAX2Q96IS3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 DDX43P3-201ENST00000441064 443 ntBASIC13.53□□□□□ -0.24
RAX2Q96IS3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 AC106730.1-201ENST00000566722 1090 ntBASIC13.53□□□□□ -0.24
RAX2Q96IS3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 AL353593.2-201ENST00000602529 1483 ntBASIC13.53□□□□□ -0.24
RAX2Q96IS3 BX276092.7-203ENST00000637198 1536 ntBASIC13.53□□□□□ -0.24
RAX2Q96IS3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAX2Q96IS3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
RAX2Q96IS3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAX2Q96IS3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAX2Q96IS3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAX2Q96IS3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAX2Q96IS3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.52□□□□□ -0.24
RAX2Q96IS3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.52□□□□□ -0.24
RAX2Q96IS3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAX2Q96IS3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
RAX2Q96IS3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RAX2Q96IS3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.52□□□□□ -0.25
RAX2Q96IS3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms