Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 AC004817.3-201ENST00000602957 2129 ntBASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 AC138894.3-201ENST00000603787 634 ntBASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 AP001269.4-201ENST00000609611 512 ntBASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 AC084018.2-201ENST00000613093 2607 ntBASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDLIM5Q96HC4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.89■□□□□ 0.3
PDLIM5Q96HC4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.89■□□□□ 0.3
PDLIM5Q96HC4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.89■□□□□ 0.3
PDLIM5Q96HC4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDLIM5Q96HC4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 AC106886.4-201ENST00000623557 2502 ntBASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 RBM17P3-201ENST00000417687 1192 ntBASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 FOSL1P1-201ENST00000511041 816 ntBASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 MIR3652-201ENST00000579335 131 ntBASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 AC097637.2-201ENST00000624096 1997 ntBASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 AC011676.5-201ENST00000624864 2660 ntBASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDLIM5Q96HC4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDLIM5Q96HC4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms